RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 THEM6Q8WUY1 208 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 ASB17Q8WXJ9 295 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 ASB9Q96DX5 294 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 ST6GALNAC5Q9BVH7 336 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 GNG12Q9UBI6 72 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 OR52A1Q9UKL2 312 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 MOB4Q9Y3A3 225 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 HSPE1-MOB4S4R3N1 261 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 FAT1Q14517 4588 aa3.25□□□□□ -1.89
VPS52-222ENST00000495981 DMBT1Q9UGM3 2413 aaPredicted RBP3.24□□□□□ -1.89
VPS52-222ENST00000495981 SRRM2Q9UQ35 2752 aaKnown RBP3.24□□□□□ -1.89
VPS52-222ENST00000495981 A0A087WW49 117 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 TCRBV4S1A1TA0A5B7 111 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 hADV38S2A0JD32 116 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 ODAMA1E959 279 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 PSMB11A5LHX3 300 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 BUB1B-PAK6H3BSN5 160 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 K7EQD1 137 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 NBR2O15453 112 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 OR2H2O95918 312 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 GALP22466 123 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 CDK2P24941 298 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 UCP1P25874 307 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 ERP29P30040 261 aaKnown RBP3.24□□□□□ -1.89
VPS52-222ENST00000495981 SLC6A1P30531 599 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 OR3A4PP47883 348 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 PRRX1P54821 245 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 CXCR4P61073 352 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 MRPS15P82914 257 aaKnown RBP3.24□□□□□ -1.89
VPS52-222ENST00000495981 PAX5Q02548 391 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 IL18R1Q13478 541 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 DIAPH2-AS1Q14236 149 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 ATXN7L3Q14CW9 347 aaPredicted RBP3.24□□□□□ -1.89
VPS52-222ENST00000495981 GRK1Q15835 563 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 C17orf58Q2M2W7 97 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 DEFB136Q30KP8 78 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 SPIN3Q5JUX0 258 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 DDI2Q5TDH0 399 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 C12orf73Q69YU5 71 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 ZNF322Q6U7Q0 402 aaPredicted RBP3.24□□□□□ -1.89
VPS52-222ENST00000495981 HEPN1Q6WQI6 88 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 ZNF329Q86UD4 541 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 DHFR2Q86XF0 187 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 CENPSQ8N2Z9 138 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 RPP25LQ8N5L8 163 aaKnown RBP3.24□□□□□ -1.89
VPS52-222ENST00000495981 Q8N6K4 173 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 TMEM104Q8NE00 496 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 KLHL30-AS1Q8NEE0 82 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 OR10AC1Q8NH08 325 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 C11orf45Q8TAV5 145 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 MYOZ3Q8TDC0 251 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 ADAT3Q96EY9 351 aaPredicted RBP3.24□□□□□ -1.89
VPS52-222ENST00000495981 NOL4LQ96MY1 436 aaPredicted RBP3.24□□□□□ -1.89
VPS52-222ENST00000495981 DUX3Q96PT4 197 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 MBOAT4Q96T53 435 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 TSC22D3Q99576 134 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 APOL4Q9BPW4 351 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 ZNF649Q9BS31 505 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 CHID1Q9BWS9 393 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 MROQ9BYG7 248 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 COMMD4Q9H0A8 199 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 GAL3ST2Q9H3Q3 398 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 LINC00574Q9H8X3 128 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 ZNF556Q9HAH1 456 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 EDA2RQ9HAV5 297 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 PLEKHA1Q9HB21 404 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 CLN6Q9NWW5 311 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 NDE1Q9NXR1 346 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 ZNF581Q9P0T4 197 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 DPM3Q9P2X0 92 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 IKZF2Q9UKS7 526 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.24□□□□□ -1.89
VPS52-222ENST00000495981 EXOSC1Q9Y3B2 195 aaKnown RBP3.24□□□□□ -1.89
VPS52-222ENST00000495981 PYGO1Q9Y3Y4 419 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 TMEM14AQ9Y6G1 99 aa3.24□□□□□ -1.89
VPS52-222ENST00000495981 TRAV6A0A075B6T7 132 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 LOC105371267A0A1B0GV96 52 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 SERTM2A0A1B0GWG4 89 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 A0A1W2PQL4 384 aaPredicted RBP3.23□□□□□ -1.89
VPS52-222ENST00000495981 TCRBV3S1A0A5B6 114 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 FAM74A7A6NL05 159 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 OOSP1A8MZH6 123 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 H3BSH0 61 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 M0QZK8 103 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 SIRPB1O00241 398 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 FGF16O43320 207 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 BUB3O43684 328 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 GATBO75879 557 aaKnown RBP3.23□□□□□ -1.89
VPS52-222ENST00000495981 DCTN3O75935 186 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 CLIC3O95833 236 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 CST1P01037 141 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 IGHG2P01859 326 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 HMGN1P05114 100 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 IGKV2-30P06310 120 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 UBCP0CG48 685 aaKnown RBP3.23□□□□□ -1.89
VPS52-222ENST00000495981 CGB3P0DN86 165 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 CGB7P0DN87 165 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 T-ENOLP0DO92 83 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 CTRB1P17538 263 aa3.23□□□□□ -1.89
VPS52-222ENST00000495981 PRKACAP17612 351 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms