RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 PRR25Q96S07 402 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 GINS4Q9BRT9 223 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 ST6GALNAC5Q9BVH7 336 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 DCSTAMPQ9H295 470 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 SLA2Q9H6Q3 261 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 DAPK2Q9UIK4 370 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 RRP15Q9Y3B9 282 aaKnown RBP5.57□□□□□ -1.52
VPS52-221ENST00000495755 STAB2Q8WWQ8 2551 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 IGHV4OR15-8A0A075B7B6 117 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 A0A087WW49 117 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 TMEM235A6NFC5 223 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 LINC00473A8K010 186 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 H3BUA1 57 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 SCGNO76038 276 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 CNIH1O95406 144 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 IGLV2-14P01704 120 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 IGHV3-11P01762 117 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 HSPB1P04792 205 aaKnown RBP5.56□□□□□ -1.52
VPS52-221ENST00000495755 CD40LGP29965 261 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 SLURP1P55000 103 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 SCAND1P57086 179 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 TPPP2P59282 170 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 UBE2KP61086 200 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 PITPNAQ00169 270 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 CD69Q07108 199 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 RTL8BQ17RB0 113 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 KCTD21Q4G0X4 260 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 CNIH2Q6PI25 160 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 ZNF429Q86V71 674 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 TEX45Q8NA69 505 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 POC5Q8NA72 575 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 OR5T1Q8NG75 326 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 GRPEL2Q8TAA5 225 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 LGALS14Q8TCE9 139 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 NUDCD2Q8WVJ2 157 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 HARBI1Q96MB7 349 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 RNF167Q9H6Y7 350 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 RHBDL2Q9NX52 303 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 ZNF256Q9Y2P7 627 aaPredicted RBP5.56□□□□□ -1.52
VPS52-221ENST00000495755 OR2W1Q9Y3N9 320 aa5.56□□□□□ -1.52
VPS52-221ENST00000495755 RBM7Q9Y580 266 aaKnown RBP5.56□□□□□ -1.52
VPS52-221ENST00000495755 J3QRK9 145 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 SHOXO15266 292 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 TUSC2O75896 110 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 CRYZL1O95825 349 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 TRGV3P03979 118 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 NHLRC4P0CG21 123 aaPredicted RBP5.55□□□□□ -1.52
VPS52-221ENST00000495755 CD36P16671 472 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 NFYAP23511 347 aaPredicted RBP5.55□□□□□ -1.52
VPS52-221ENST00000495755 GNG2P59768 71 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 MXD1Q05195 221 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 CBX3Q13185 183 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 EIF4EBP1Q13541 118 aaPredicted RBP5.55□□□□□ -1.52
VPS52-221ENST00000495755 NEDD8Q15843 81 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 PRSS8Q16651 343 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 VMA21Q3ZAQ7 101 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 ACSM6Q6P461 480 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 ZNF645Q8N7E2 425 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 OR5H6Q8NGV6 325 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 OSR1Q8TAX0 266 aaPredicted RBP5.55□□□□□ -1.52
VPS52-221ENST00000495755 SLC25A38Q96DW6 304 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 TMEM68Q96MH6 324 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 TINAGL1Q9GZM7 467 aaPredicted RBP5.55□□□□□ -1.52
VPS52-221ENST00000495755 ANXA10Q9UJ72 324 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 ETV7Q9Y603 341 aa5.55□□□□□ -1.52
VPS52-221ENST00000495755 TRAV18A0A075B6X5 111 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 A0A0A6YYH2 397 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 IGKV1D-13A0A0B4J2D9 117 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 A0A0G2JLM5 398 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 LOC100506127A0A0U1RQW1 187 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 C13orf42A0A1B0GVH6 325 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 MSGN1A6NI15 193 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 A6NJ64 397 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 TMEM127O75204 238 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 SAP30O75446 220 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 SLC22A5O76082 557 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 IGKV1-13P0DP09 117 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 AADACP22760 399 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 BRWD1-AS2P59051 145 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 RPL30P62888 115 aaKnown RBP5.54□□□□□ -1.52
VPS52-221ENST00000495755 IDNKQ5T6J7 187 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 IDO2Q6ZQW0 420 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 OVCH2Q7RTZ1 564 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 HOGA1Q86XE5 327 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 RANGRFQ9HD47 186 aaPredicted RBP5.54□□□□□ -1.52
VPS52-221ENST00000495755 ZNF355PQ9NSJ1 428 aa5.54□□□□□ -1.52
VPS52-221ENST00000495755 RBMX2Q9Y388 322 aaKnown RBP5.54□□□□□ -1.52
VPS52-221ENST00000495755 DNAH7Q8WXX0 4024 aa5.53□□□□□ -1.52
VPS52-221ENST00000495755 FCGR3BO75015 233 aa5.53□□□□□ -1.52
VPS52-221ENST00000495755 RBMXL2O75526 392 aaKnown RBP5.53□□□□□ -1.52
VPS52-221ENST00000495755 LY86O95711 162 aa5.53□□□□□ -1.52
VPS52-221ENST00000495755 SAA1P0DJI8 122 aaPredicted RBP5.53□□□□□ -1.52
VPS52-221ENST00000495755 PTHLHP12272 177 aa5.53□□□□□ -1.52
VPS52-221ENST00000495755 SPNP16150 400 aa5.53□□□□□ -1.52
VPS52-221ENST00000495755 ZP3P21754 424 aa5.53□□□□□ -1.52
VPS52-221ENST00000495755 DYRK1AQ13627 763 aa5.53□□□□□ -1.52
VPS52-221ENST00000495755 KLF5Q13887 457 aaPredicted RBP5.53□□□□□ -1.52
VPS52-221ENST00000495755 CDK10Q15131 360 aa5.53□□□□□ -1.52
VPS52-221ENST00000495755 MSMO1Q15800 293 aa5.53□□□□□ -1.52
VPS52-221ENST00000495755 TNXAQ16473 311 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms