RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 GUCA2BQ16661 112 aa13.21□□□□□ -0.29
TMEM53-209ENST00000495630 NANOGP1Q8N7R0 232 aa13.21□□□□□ -0.29
TMEM53-209ENST00000495630 OR6M1Q8NGM8 313 aa13.21□□□□□ -0.29
TMEM53-209ENST00000495630 CMSS1Q9BQ75 279 aaKnown RBP13.21□□□□□ -0.29
TMEM53-209ENST00000495630 SDHAF2Q9NX18 166 aa13.21□□□□□ -0.29
TMEM53-209ENST00000495630 ZNF230Q9UIE0 474 aaPredicted RBP13.21□□□□□ -0.29
TMEM53-209ENST00000495630 FOXI3A8MTJ6 420 aaPredicted RBP13.2□□□□□ -0.3
TMEM53-209ENST00000495630 TUSC2O75896 110 aa13.2□□□□□ -0.3
TMEM53-209ENST00000495630 FOLR2P14207 255 aa13.2□□□□□ -0.3
TMEM53-209ENST00000495630 TPBGQ13641 420 aa13.2□□□□□ -0.3
TMEM53-209ENST00000495630 EXOSC2Q13868 293 aaKnown RBP13.2□□□□□ -0.3
TMEM53-209ENST00000495630 RTL8BQ17RB0 113 aa13.2□□□□□ -0.3
TMEM53-209ENST00000495630 VMA21Q3ZAQ7 101 aa13.2□□□□□ -0.3
TMEM53-209ENST00000495630 RBM48Q5RL73 367 aaKnown RBP13.2□□□□□ -0.3
TMEM53-209ENST00000495630 OR4A4PQ8NGN8 299 aa13.2□□□□□ -0.3
TMEM53-209ENST00000495630 CYGBQ8WWM9 190 aa13.2□□□□□ -0.3
TMEM53-209ENST00000495630 PSORS1C1Q9UIG5 152 aa13.2□□□□□ -0.3
TMEM53-209ENST00000495630 C2orf70A6NJV1 201 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 MPPED1O15442 326 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 UBE2KP61086 200 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 TNXAQ16473 311 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 HSD17B12Q53GQ0 312 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 SLC16A13Q7RTY0 426 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 CEACAM19Q7Z692 300 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 NECAP1Q8NC96 275 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 SRSF12Q8WXF0 261 aaKnown RBP13.19□□□□□ -0.3
TMEM53-209ENST00000495630 ARHGAP5-AS1Q96IT6 56 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 ST6GALNAC5Q9BVH7 336 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 WFDC10AQ9H1F0 79 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 PLCXD1Q9NUJ7 323 aa13.19□□□□□ -0.3
TMEM53-209ENST00000495630 LGALS9O00182 355 aa13.18□□□□□ -0.3
TMEM53-209ENST00000495630 DHRSXQ8N5I4 330 aa13.18□□□□□ -0.3
TMEM53-209ENST00000495630 TTC9CQ8N5M4 171 aa13.18□□□□□ -0.3
TMEM53-209ENST00000495630 SPIN2AQ99865 258 aa13.18□□□□□ -0.3
TMEM53-209ENST00000495630 SPIN2BQ9BPZ2 258 aa13.18□□□□□ -0.3
TMEM53-209ENST00000495630 OVOL2Q9BRP0 275 aa13.18□□□□□ -0.3
TMEM53-209ENST00000495630 PECRQ9BY49 303 aa13.18□□□□□ -0.3
TMEM53-209ENST00000495630 OR2D2Q9H210 308 aa13.18□□□□□ -0.3
TMEM53-209ENST00000495630 DMRT1Q9Y5R6 373 aa13.18□□□□□ -0.3
TMEM53-209ENST00000495630 FABP7O15540 132 aa13.17□□□□□ -0.3
TMEM53-209ENST00000495630 GGCTO75223 188 aaKnown RBP13.17□□□□□ -0.3
TMEM53-209ENST00000495630 DIRAS3O95661 229 aa13.17□□□□□ -0.3
TMEM53-209ENST00000495630 PRH1P02810 166 aa13.17□□□□□ -0.3
TMEM53-209ENST00000495630 ZNF45Q02386 682 aa13.17□□□□□ -0.3
TMEM53-209ENST00000495630 AHSA2Q719I0 299 aa13.17□□□□□ -0.3
TMEM53-209ENST00000495630 SLC25A42Q86VD7 318 aa13.17□□□□□ -0.3
TMEM53-209ENST00000495630 OR10J5Q8NHC4 309 aa13.17□□□□□ -0.3
TMEM53-209ENST00000495630 WDR89Q96FK6 387 aaPredicted RBP13.17□□□□□ -0.3
TMEM53-209ENST00000495630 ADTRPQ96IZ2 230 aa13.17□□□□□ -0.3
TMEM53-209ENST00000495630 ALMS1Q8TCU4 4167 aa13.17□□□□□ -0.3
TMEM53-209ENST00000495630 TRBV6-7A0A0A0MS04 114 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 SLC17A2O00624 439 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 BET1O15155 118 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 ACTL6BO94805 426 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 OR2C1O95371 312 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 CD3GP09693 182 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 UCHL1P09936 223 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 CBLN1P23435 193 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 P2RY14Q15391 338 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 LAIR2Q6ISS4 152 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 GPHB5Q86YW7 130 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 OSR1Q8TAX0 266 aaPredicted RBP13.16□□□□□ -0.3
TMEM53-209ENST00000495630 ACOT12Q8WYK0 555 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 DDB2Q92466 427 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 GGTLC1Q9BX51 225 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 PLGRKTQ9HBL7 147 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 C8orf4Q9NR00 106 aa13.16□□□□□ -0.3
TMEM53-209ENST00000495630 LOC102724200A0A096LPH7 203 aaPredicted RBP13.15□□□□□ -0.3
TMEM53-209ENST00000495630 CXorf65A6NEN9 183 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 NUPR2A6NF83 97 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 CREBL2O60519 120 aaPredicted RBP13.15□□□□□ -0.3
TMEM53-209ENST00000495630 CRYZL1O95825 349 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 RANBP1P43487 201 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 MAP2K4P45985 399 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 MRPS15P82914 257 aaKnown RBP13.15□□□□□ -0.3
TMEM53-209ENST00000495630 C15orf32Q32M92 178 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 ANKRD55Q3KP44 614 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 IGSF11Q5DX21 431 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 PLAC9Q5JTB6 97 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 IDO2Q6ZQW0 420 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 OR56B1Q8NGI3 324 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 C5orf30Q96GV9 206 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 CABLES2Q9BTV7 478 aa13.15□□□□□ -0.3
TMEM53-209ENST00000495630 ZNF430Q9H8G1 570 aaPredicted RBP13.15□□□□□ -0.3
TMEM53-209ENST00000495630 RBM7Q9Y580 266 aaKnown RBP13.15□□□□□ -0.3
TMEM53-209ENST00000495630 PPP5D1E7EU14 171 aa13.14□□□□□ -0.31
TMEM53-209ENST00000495630 GSTT2P0CG29 244 aa13.14□□□□□ -0.31
TMEM53-209ENST00000495630 GSTT2BP0CG30 244 aa13.14□□□□□ -0.31
TMEM53-209ENST00000495630 DUTP33316 252 aaKnown RBP13.14□□□□□ -0.31
TMEM53-209ENST00000495630 CDK10Q15131 360 aa13.14□□□□□ -0.31
TMEM53-209ENST00000495630 ZNF57Q68EA5 555 aaPredicted RBP13.14□□□□□ -0.31
TMEM53-209ENST00000495630 CEMP1Q6PRD7 247 aaPredicted RBP13.14□□□□□ -0.31
TMEM53-209ENST00000495630 WFDC3Q8IUB2 231 aa13.14□□□□□ -0.31
TMEM53-209ENST00000495630 MMD2Q8IY49 270 aa13.14□□□□□ -0.31
TMEM53-209ENST00000495630 C8orf59Q8N0T1 100 aaPredicted RBP13.14□□□□□ -0.31
TMEM53-209ENST00000495630 PACRGLQ8N7B6 248 aa13.14□□□□□ -0.31
TMEM53-209ENST00000495630 BPIFB6Q8NFQ5 453 aa13.14□□□□□ -0.31
TMEM53-209ENST00000495630 CENPOQ9BU64 300 aa13.14□□□□□ -0.31
TMEM53-209ENST00000495630 MND1Q9BWT6 205 aa13.14□□□□□ -0.31
TMEM53-209ENST00000495630 FKBP14Q9NWM8 211 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms