RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PSG2P11465 335 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 BLVRBP30043 206 aaPredicted RBP5.08□□□□□ -1.6
VIM-207ENST00000495528 S100A5P33763 92 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 CEBPDP49716 269 aaPredicted RBP5.08□□□□□ -1.6
VIM-207ENST00000495528 TMEM50BP56557 158 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 RPS27AP62979 156 aaKnown RBP5.08□□□□□ -1.6
VIM-207ENST00000495528 LRRC75BQ2VPJ9 315 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 MOGAT2Q3SYC2 334 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 CDNFQ49AH0 187 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 UBE2NLQ5JXB2 153 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 NCR3LG1Q68D85 454 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 C16orf54Q6UWD8 224 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 LAX1Q8IWV1 398 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 Q8IYB0 196 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 FAM89BQ8N5H3 189 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 CD177Q8N6Q3 437 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 Q8NFD4 153 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 OR4S1Q8NGB4 309 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 OR4C13Q8NGP0 309 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 OR6Q1Q8NGQ2 317 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 ANGPTL6Q8NI99 470 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 MRPS24Q96EL2 167 aaKnown RBP5.08□□□□□ -1.6
VIM-207ENST00000495528 DIRAS2Q96HU8 199 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 GAFA1Q96PS6 74 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 CITED2Q99967 270 aaPredicted RBP5.08□□□□□ -1.6
VIM-207ENST00000495528 NICN1Q9BSH3 213 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 FAAP24Q9BTP7 215 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 TMEM59Q9BXS4 323 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 LPAR5Q9H1C0 372 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 RANBP3Q9H6Z4 567 aaPredicted RBP5.08□□□□□ -1.6
VIM-207ENST00000495528 RHOFQ9HBH0 211 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 DIABLOQ9NR28 239 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 RHBDL2Q9NX52 303 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 IL36GQ9NZH8 169 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 ZNF581Q9P0T4 197 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 GLS2Q9UI32 602 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 PEX16Q9Y5Y5 336 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 ETV7Q9Y603 341 aa5.08□□□□□ -1.6
VIM-207ENST00000495528 IGKV1D-17A0A075B6S4 117 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 FABP12A6NFH5 140 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 K7EIL1 84 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 SIRPB1O00241 398 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 SIGLEC5O15389 551 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 OR7C1O76099 320 aaPredicted RBP5.07□□□□□ -1.6
VIM-207ENST00000495528 OR2H2O95918 312 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 PTHLHP12272 177 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 ZNF44P15621 663 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 IGLL1P15814 213 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 FUT3P21217 361 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 CDK2P24941 298 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 RAB13P51153 203 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 RBM11P57052 281 aaKnown RBP5.07□□□□□ -1.6
VIM-207ENST00000495528 DYNC1I2Q13409 638 aaKnown RBP5.07□□□□□ -1.6
VIM-207ENST00000495528 SMIM21Q3B7S5 101 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 Q6P435 159 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 CNIH2Q6PI25 160 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 CCBE1Q6UXH8 406 aaPredicted RBP5.07□□□□□ -1.6
VIM-207ENST00000495528 NDUFA11Q86Y39 141 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 ZNRF1Q8ND25 227 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 WFDC9Q8NEX5 89 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 OR4F17Q8NGA8 305 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 OR4M1Q8NGD0 313 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 OR56B1Q8NGI3 324 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 OR10R2Q8NGX6 335 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 NEK7Q8TDX7 302 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 PTX4Q96A99 478 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 SLC25A38Q96DW6 304 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 CYYR1Q96J86 154 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 NEDD4LQ96PU5 975 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 OR4F4Q96R69 305 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 PECRQ9BY49 303 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 DNTTIP1Q9H147 329 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 ABCG5Q9H222 651 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 ZNF702PQ9H963 129 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 HES4Q9HCC6 221 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 RAB18Q9NP72 206 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 SCRT2Q9NQ03 307 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 PLEKHJ1Q9NW61 149 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 EXTL2Q9UBQ6 330 aa5.07□□□□□ -1.6
VIM-207ENST00000495528 ELF5Q9UKW6 265 aaPredicted RBP5.07□□□□□ -1.6
VIM-207ENST00000495528 KIAA2026Q5HYC2 2103 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 TRAV24A0A0B4J272 114 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 NKX6-3A6NJ46 265 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 MCRIP1C9JLW8 97 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 HAND1O96004 215 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 HLA-DQB1P01920 261 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 CFC1BP0CG36 223 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 CFC1P0CG37 223 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 GNB3P16520 340 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 TALDO1P37837 337 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 ARFRP1Q13795 201 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 IL18Q14116 193 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 ZNF146Q15072 292 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 AANATQ16613 207 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 DEFB121Q5J5C9 76 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 TMEM69Q5SWH9 247 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 RAB12Q6IQ22 244 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 FAM131AQ6UXB0 335 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 C6orf201Q7Z4U5 140 aa5.06□□□□□ -1.6
VIM-207ENST00000495528 LHFPL4Q7Z7J7 247 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms