RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	ABHD5	Q8WTS1	349 aa		10.37	□□□□□ -0.75
RBM28-208	ENST00000495327	AUNIP	Q9H7T9	357 aa		10.37	□□□□□ -0.75
RBM28-208	ENST00000495327	GNB4	Q9HAV0	340 aa		10.37	□□□□□ -0.75
RBM28-208	ENST00000495327	COL7A1	Q02388	2944 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	SHOX	O15266	292 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	CBX5	P45973	191 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	RAB25	P57735	213 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	LSM3	P62310	102 aa	Known RBP	10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	UNQ5815/PRO19632	Q6UWF5	114 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	KCTD9	Q7L273	389 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	HOGA1	Q86XE5	327 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	OR11H1	Q8NG94	326 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	OSR1	Q8TAX0	266 aa	Predicted RBP	10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	SLC25A46	Q96AG3	418 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	KCTD12	Q96CX2	325 aa	Known RBP	10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	CLCC1	Q96S66	551 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	FAM103A1	Q9BTL3	118 aa	Known RBP	10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	SLA2	Q9H6Q3	261 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	RBMX2	Q9Y388	322 aa	Known RBP	10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	A3GALT2	U3KPV4	340 aa		10.36	□□□□□ -0.75
RBM28-208	ENST00000495327	TNC	P24821	2201 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	IGKV1D-13	A0A0B4J2D9	117 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327		H3BUA1	57 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	ARPC1B	O15143	372 aa	Known RBP	10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	XRCC3	O43542	346 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	CRYZL1	O95825	349 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	IGLV2-14	P01704	120 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	OR8U8	P0C7N1	319 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	IGKV1-13	P0DP09	117 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	ARPC4	P59998	168 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	KRTAP10-11	P60412	298 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	UBE2K	P61086	200 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	GNB1	P62873	340 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	ZNF616	Q08AN1	781 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	FXYD3	Q14802	87 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	MSMO1	Q15800	293 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	GVQW1	Q8N7I0	195 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	LFNG	Q8NES3	379 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	OR13F1	Q8NGS4	319 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	SNAPC3	Q92966	411 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	S100A16	Q96FQ6	103 aa	Known RBP	10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	FUNDC2	Q9BWH2	189 aa		10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	ZMAT5	Q9UDW3	170 aa	Known RBP	10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	MRPS7	Q9Y2R9	242 aa	Known RBP	10.35	□□□□□ -0.75
RBM28-208	ENST00000495327	DNAH9	Q9NYC9	4486 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	SRRM4	A7MD48	611 aa	Known RBP	10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	LGALS1	P09382	135 aa	Known RBP	10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	SMIM18	P0DKX4	95 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	CD40LG	P29965	261 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	HOXD3	P31249	432 aa	Predicted RBP	10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	NCS1	P62166	190 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	PJVK	Q0ZLH3	352 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	VMA21	Q3ZAQ7	101 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	C9orf66	Q5T8R8	295 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	ASPHD1	Q5U4P2	390 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	TEX45	Q8NA69	505 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	GRPEL2	Q8TAA5	225 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	TMEM68	Q96MH6	324 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	HSD17B10	Q99714	261 aa	Known RBP	10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	ANAPC10	Q9UM13	185 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327	PRELID3B	Q9Y3B1	194 aa		10.34	□□□□□ -0.75
RBM28-208	ENST00000495327		J3QRK9	145 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327		K7EIL1	84 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	CREBL2	O60519	120 aa	Predicted RBP	10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	BRI3	O95415	125 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	TPPP2	P59282	170 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	RPL30	P62888	115 aa	Known RBP	10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	MRGPRG-AS1	Q2M3A8	158 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	TMEM69	Q5SWH9	247 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	ZNF66	Q6ZN08	573 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	SAMD12	Q8N8I0	201 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	POC5	Q8NA72	575 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	OR5AP2	Q8NGF4	316 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	OR1N2	Q8NGR9	330 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	OR4S2	Q8NH73	311 aa		10.33	□□□□□ -0.76
RBM28-208	ENST00000495327	FCGR3B	O75015	233 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	CNIH1	O95406	144 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	PPY	P01298	95 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	SAA1	P0DJI8	122 aa	Predicted RBP	10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	PTHLH	P12272	177 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	AADAC	P22760	399 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	FCGR2C	P31995	323 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	TAS2R20	P59543	309 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	CDK10	Q15131	360 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	PRSS8	Q16651	343 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	CASTOR1	Q8WTX7	329 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	CMTM3	Q96MX0	182 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	OR5B12	Q96R08	314 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	IFT46	Q9NQC8	304 aa		10.32	□□□□□ -0.76
RBM28-208	ENST00000495327	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.31	□□□□□ -0.76
RBM28-208	ENST00000495327	SEC14L6	B5MCN3	397 aa		10.31	□□□□□ -0.76
RBM28-208	ENST00000495327	LINC01619	G3V211	115 aa		10.31	□□□□□ -0.76
RBM28-208	ENST00000495327	RAMP3	O60896	148 aa		10.31	□□□□□ -0.76
RBM28-208	ENST00000495327	GABARAP	O95166	117 aa		10.31	□□□□□ -0.76
RBM28-208	ENST00000495327	TRGV3	P03979	118 aa		10.31	□□□□□ -0.76
RBM28-208	ENST00000495327	KIR2DS2	P43631	304 aa		10.31	□□□□□ -0.76
RBM28-208	ENST00000495327	INSL3	P51460	131 aa		10.31	□□□□□ -0.76
RBM28-208	ENST00000495327	VBP1	P61758	197 aa		10.31	□□□□□ -0.76
RBM28-208	ENST00000495327	DGCR2	P98153	550 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms