RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 IDO2Q6ZQW0 420 aa8.92□□□□□ -0.98
VTI1A-208ENST00000494728 H1FOOQ8IZA3 346 aaPredicted RBP8.92□□□□□ -0.98
VTI1A-208ENST00000494728 OR10J5Q8NHC4 309 aa8.92□□□□□ -0.98
VTI1A-208ENST00000494728 MYL9P24844 172 aa8.91□□□□□ -0.98
VTI1A-208ENST00000494728 DUTP33316 252 aaKnown RBP8.91□□□□□ -0.98
VTI1A-208ENST00000494728 SERPINB10P48595 397 aa8.91□□□□□ -0.98
VTI1A-208ENST00000494728 PITPNAQ00169 270 aa8.91□□□□□ -0.98
VTI1A-208ENST00000494728 DYRK1AQ13627 763 aa8.91□□□□□ -0.98
VTI1A-208ENST00000494728 SRSF7Q16629 238 aaKnown RBP eCLIP8.91□□□□□ -0.98
VTI1A-208ENST00000494728 NUDCD2Q8WVJ2 157 aa8.91□□□□□ -0.98
VTI1A-208ENST00000494728 SLA2Q9H6Q3 261 aa8.91□□□□□ -0.98
VTI1A-208ENST00000494728 IGKV1D-13A0A0B4J2D9 117 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 ANKRD34BA5PLL1 514 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 J3QRK9 145 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 PDCD5O14737 125 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 SHOXO15266 292 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 CNIH1O95406 144 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 DIRAS3O95661 229 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 CRYZL1O95825 349 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 IGLV1-51P01701 117 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 IGLV2-14P01704 120 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 IGKV1-13P0DP09 117 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 GADD45AP24522 165 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 HSPA13P48723 471 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 PSMD7P51665 324 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 GABARAPL2P60520 117 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 MRPS15P82914 257 aaKnown RBP8.9□□□□□ -0.98
VTI1A-208ENST00000494728 TAGLNQ01995 201 aaKnown RBP8.9□□□□□ -0.98
VTI1A-208ENST00000494728 ARFRP1Q13795 201 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 C10orf55Q5SWW7 151 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 UBE2UQ5VVX9 321 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 IL34Q6ZMJ4 242 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 Q6ZS49 121 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 C19orf35Q6ZS72 473 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 Q8N1Y9 231 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 GINS4Q9BRT9 223 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 VCX3BQ9H321 246 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 ZNF355PQ9NSJ1 428 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 TXNL4BQ9NX01 149 aaKnown RBP8.9□□□□□ -0.98
VTI1A-208ENST00000494728 BLOC1S6Q9UL45 172 aa8.9□□□□□ -0.98
VTI1A-208ENST00000494728 TMEM235A6NFC5 223 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 SSX5O60225 188 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 PRH1P02810 166 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 SAA1P0DJI8 122 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-208ENST00000494728 RPL30P62888 115 aaKnown RBP8.89□□□□□ -0.99
VTI1A-208ENST00000494728 ZNF45Q02386 682 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 OR2B11Q5JQS5 317 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 SPARTQ8N0X7 666 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 ADAD2Q8NCV1 583 aaKnown RBP8.89□□□□□ -0.99
VTI1A-208ENST00000494728 OR6Q1Q8NGQ2 317 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 LGALS14Q8TCE9 139 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 RCHY1Q96PM5 261 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 RSRP1Q9BUV0 290 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 TINAGL1Q9GZM7 467 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-208ENST00000494728 ATG5Q9H1Y0 275 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 RNF167Q9H6Y7 350 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 RAB26Q9ULW5 256 aa8.89□□□□□ -0.99
VTI1A-208ENST00000494728 PLECQ15149 4684 aaKnown RBP8.89□□□□□ -0.99
VTI1A-208ENST00000494728 C13orf42A0A1B0GVH6 325 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 H3BUA1 57 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 CLEC2LP0C7M8 214 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 NFYAP23511 347 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-208ENST00000494728 DTYMKP23919 212 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 PSMB9P28065 219 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 LGALS7P47929 136 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 UBE2KP61086 200 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 KLF5Q13887 457 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-208ENST00000494728 TNXAQ16473 311 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 PRSS8Q16651 343 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 RTL8BQ17RB0 113 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 CDNFQ49AH0 187 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 HACD4Q5VWC8 232 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 SRSF12Q8WXF0 261 aaKnown RBP8.88□□□□□ -0.99
VTI1A-208ENST00000494728 OR4C12Q96R67 309 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 GPHA2Q96T91 129 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 OR51E2Q9H255 320 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 ZNF430Q9H8G1 570 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-208ENST00000494728 COA4Q9NYJ1 87 aa8.88□□□□□ -0.99
VTI1A-208ENST00000494728 EPPK1P58107 5090 aaKnown RBP8.87□□□□□ -0.99
VTI1A-208ENST00000494728 ALMS1Q8TCU4 4167 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 A0A1B0GW64 132 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 IZUMO1RA6ND01 250 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 METTL21EPA6NDL7 271 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 MSGN1A6NI15 193 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 NOTOA8MTQ0 251 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 ATP6V1G2O95670 118 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 IGHV4-30-4P0DP06 118 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 PTHLHP12272 177 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 EDN2P20800 178 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 GALP22466 123 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 CD40LGP29965 261 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 FGF9P31371 208 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-208ENST00000494728 SYNJ2BPP57105 145 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 BRWD1-AS2P59051 145 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 EIF4EBP1Q13541 118 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-208ENST00000494728 ZNF343Q6P1L6 599 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 SFXN4Q6P4A7 337 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 VKORC1L1Q8N0U8 176 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 ZNF645Q8N7E2 425 aa8.87□□□□□ -0.99
VTI1A-208ENST00000494728 OR5H6Q8NGV6 325 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms