RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 DANCRP0C864 163 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 HAPLN4Q86UW8 402 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 LINC00052Q96N35 136 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 MED6O75586 246 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 KIR2DS2P43631 304 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 ARL16Q0P5N6 197 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 AARDQ4LEZ3 155 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 TMEM155Q4W5P6 130 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 PXDC1Q5TGL8 231 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 ZNF841Q6ZN19 808 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 STX12Q86Y82 276 aa13.54□□□□□ -0.24
ATG4B-225ENST00000494465 TET2Q6N021 2002 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-225ENST00000494465 LY6HO94772 140 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 THBS3P49746 956 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 MARC2Q969Z3 335 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 RFNGQ9Y644 331 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 C19orf84I3L1E1 186 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 METTL15P1P0C7V9 234 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 DTX2Q86UW9 622 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 VKORC1L1Q8N0U8 176 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 C11orf42Q8N5U0 333 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 RBMXL1Q96E39 390 aaKnown RBP13.53□□□□□ -0.24
ATG4B-225ENST00000494465 RAB1BQ9H0U4 201 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 SESN1Q9Y6P5 492 aa13.53□□□□□ -0.24
ATG4B-225ENST00000494465 FAM90A9PA6NNJ1 464 aa13.52□□□□□ -0.24
ATG4B-225ENST00000494465 ZP3P21754 424 aa13.52□□□□□ -0.24
ATG4B-225ENST00000494465 ATP6V0CP27449 155 aa13.52□□□□□ -0.24
ATG4B-225ENST00000494465 STPG2Q8N412 459 aa13.52□□□□□ -0.24
ATG4B-225ENST00000494465 OR4S2Q8NH73 311 aa13.52□□□□□ -0.24
ATG4B-225ENST00000494465 ZDHHC16Q969W1 377 aa13.52□□□□□ -0.24
ATG4B-225ENST00000494465 ATP5SQ99766 215 aa13.52□□□□□ -0.24
ATG4B-225ENST00000494465 USP24Q9UPU5 2620 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 MALRD1Q5VYJ5 2156 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 CT45A6P0DMU7 189 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 CT45A5P0DMU8 189 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 CT45A7P0DMV0 189 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 NQO2P16083 231 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 SPANXN5Q5MJ07 72 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 ZNF833PQ6ZTB9 187 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 SSX9Q7RTT3 188 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 ADTRPQ96IZ2 230 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 QTRT1Q9BXR0 403 aaKnown RBP13.52□□□□□ -0.25
ATG4B-225ENST00000494465 PARP11Q9NR21 331 aa13.52□□□□□ -0.25
ATG4B-225ENST00000494465 RAB19A4D1S5 217 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 SHOXO15266 292 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 AVPI1Q5T686 147 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 BTNL8Q6UX41 500 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 ZNF596Q8TC21 504 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 MMP26Q9NRE1 261 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 CACFD1Q9UGQ2 172 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 TRBV23-1A0A0A0MS06 115 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 CRYZL1O95825 349 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 OR2B8PP59922 312 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 LYPD6BQ8NI32 183 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 OR4C12Q96R67 309 aa13.51□□□□□ -0.25
ATG4B-225ENST00000494465 TSNAXQ99598 290 aaKnown RBP13.51□□□□□ -0.25
ATG4B-225ENST00000494465 RALYQ9UKM9 306 aaKnown RBP13.51□□□□□ -0.25
ATG4B-225ENST00000494465 A0A087X0M5 115 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 TRAV3A0A0B4J244 114 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 A0A1B0GX30 115 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 IGFBP2P18065 325 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 ARHGDIBP52566 201 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 BLOC1S1P78537 153 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 RELBQ01201 579 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 Q6ZRG5 221 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 C8orf31Q8N9H6 132 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 DTD1Q8TEA8 209 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 HRH4Q9H3N8 390 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 TMEM140Q9NV12 185 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 KRBOX1C9JBD0 128 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 C1QL1O75973 258 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 FHITP49789 147 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 TUSC1Q2TAM9 212 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 SPINK9Q5DT21 86 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 LINC00311Q8N616 119 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 ZNF525Q8N782 197 aa13.5□□□□□ -0.25
ATG4B-225ENST00000494465 RBMXL2O75526 392 aaKnown RBP13.49□□□□□ -0.25
ATG4B-225ENST00000494465 DFFBO76075 338 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 IGHV1-8P0DP01 117 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 ERVK-16P61578 105 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 RUNX1Q01196 453 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 CCDC28AQ8IWP9 274 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 NEU4Q8WWR8 484 aaPredicted RBP13.49□□□□□ -0.25
ATG4B-225ENST00000494465 PMS2P5A8MQ11 134 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 NUDT19A8MXV4 375 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 J3QR06 171 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 SRSF3P84103 164 aaKnown RBP13.49□□□□□ -0.25
ATG4B-225ENST00000494465 PJVKQ0ZLH3 352 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 POU2AF1Q16633 256 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 PDLIM3Q53GG5 364 aaPredicted RBP13.49□□□□□ -0.25
ATG4B-225ENST00000494465 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 IL34Q6ZMJ4 242 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 BPIFCQ8NFQ6 507 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 RHOVQ96L33 236 aa13.49□□□□□ -0.25
ATG4B-225ENST00000494465 IGKV1-16P04430 117 aa13.48□□□□□ -0.25
ATG4B-225ENST00000494465 RAB5CP51148 216 aa13.48□□□□□ -0.25
ATG4B-225ENST00000494465 TMEM182Q6ZP80 229 aaPredicted RBP13.48□□□□□ -0.25
ATG4B-225ENST00000494465 OR2G3Q8NGZ4 309 aa13.48□□□□□ -0.25
ATG4B-225ENST00000494465 ST6GALNAC6Q969X2 333 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms