RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 HPRT1P00492 218 aa12□□□□□ -0.49
ACTB-213ENST00000493945 IGLV2-14P01704 120 aa12□□□□□ -0.49
ACTB-213ENST00000493945 AKR1C4P17516 323 aa12□□□□□ -0.49
ACTB-213ENST00000493945 PI3P19957 117 aa12□□□□□ -0.49
ACTB-213ENST00000493945 BTCP35070 178 aa12□□□□□ -0.49
ACTB-213ENST00000493945 RAB25P57735 213 aa12□□□□□ -0.49
ACTB-213ENST00000493945 HILS1P60008 231 aa12□□□□□ -0.49
ACTB-213ENST00000493945 RPS16P62249 146 aaKnown RBP12□□□□□ -0.49
ACTB-213ENST00000493945 DIAPH2-AS1Q14236 149 aa12□□□□□ -0.49
ACTB-213ENST00000493945 TRIM16LQ309B1 348 aa12□□□□□ -0.49
ACTB-213ENST00000493945 VMA21Q3ZAQ7 101 aa12□□□□□ -0.49
ACTB-213ENST00000493945 LDLRAD2Q5SZI1 272 aa12□□□□□ -0.49
ACTB-213ENST00000493945 DYNAPQ8N1N2 210 aa12□□□□□ -0.49
ACTB-213ENST00000493945 ZNF383Q8NA42 475 aa12□□□□□ -0.49
ACTB-213ENST00000493945 MINDY2Q8NBR6 621 aa12□□□□□ -0.49
ACTB-213ENST00000493945 GPN1Q9HCN4 374 aaPredicted RBP12□□□□□ -0.49
ACTB-213ENST00000493945 VSIG4Q9Y279 399 aa12□□□□□ -0.49
ACTB-213ENST00000493945 MOB4Q9Y3A3 225 aa12□□□□□ -0.49
ACTB-213ENST00000493945 IGHV3-72A0A0B4J1Y9 119 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 MDFIC2A0A1B0GVS7 189 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 CRYM-AS1A6NIL9 109 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 FAM90A9PA6NNJ1 464 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 PRAF2O60831 178 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 OR2F2O95006 317 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 CRYZL1O95825 349 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 DHFRP00374 187 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 CRYBA1P05813 215 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 H2AFB2P0C5Z0 115 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 VAMP1P23763 118 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 RAG2P55895 527 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 IFITM3Q01628 133 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 EBI3Q14213 229 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 PLGLAQ15195 96 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 MMDQ15546 238 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 C4orf46Q504U0 113 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 GLDNQ6ZMI3 551 aaPredicted RBP11.99□□□□□ -0.49
ACTB-213ENST00000493945 RNASE11Q8TAA1 199 aaKnown RBP11.99□□□□□ -0.49
ACTB-213ENST00000493945 DDB2Q92466 427 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 AJUBAQ96IF1 538 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 SLC25A33Q9BSK2 321 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 PLEKHA2Q9HB19 425 aa11.99□□□□□ -0.49
ACTB-213ENST00000493945 DNAJC9-AS1A6NH13 148 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 LINC00473A8K010 186 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 NBR2O15453 112 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 FGF16O43320 207 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 PEX14O75381 377 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 IGHV4-59P01825 116 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 HLA-AP01891 365 aaKnown RBP11.98□□□□□ -0.49
ACTB-213ENST00000493945 NQO2P16083 231 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 EIF4EBP1Q13541 118 aaPredicted RBP11.98□□□□□ -0.49
ACTB-213ENST00000493945 TMEM177Q53S58 311 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 OR2B11Q5JQS5 317 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 NRARPQ7Z6K4 114 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 SLC25A42Q86VD7 318 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 DUSP18Q8NEJ0 188 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 COQ8AQ8NI60 647 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 GALNT14Q96FL9 552 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 C5orf30Q96GV9 206 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 EAF1Q96JC9 268 aaPredicted RBP11.98□□□□□ -0.49
ACTB-213ENST00000493945 ZNF48Q96MX3 618 aaPredicted RBP11.98□□□□□ -0.49
ACTB-213ENST00000493945 RTBDNQ9BSG5 229 aaPredicted RBP11.98□□□□□ -0.49
ACTB-213ENST00000493945 NPFFR1Q9GZQ6 430 aa11.98□□□□□ -0.49
ACTB-213ENST00000493945 ALX4Q9H161 411 aaPredicted RBP11.98□□□□□ -0.49
ACTB-213ENST00000493945 TRAV6A0A075B6T7 132 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 NCBP2LA6PVI3 153 aaKnown RBP11.97□□□□□ -0.49
ACTB-213ENST00000493945 PROP1O75360 226 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 AKR1C2P52895 323 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 LY6EQ16553 131 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 TUSC1Q2TAM9 212 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 ZNF695Q8IW36 515 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 DMBX1Q8NFW5 382 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 ZFAND2BQ8WV99 257 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 IL22RA2Q969J5 263 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 MRGPRFQ96AM1 343 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 RBM14Q96PK6 669 aaKnown RBP11.97□□□□□ -0.49
ACTB-213ENST00000493945 RASL11BQ9BPW5 248 aa11.97□□□□□ -0.49
ACTB-213ENST00000493945 DUXBA0A1W2PPF3 345 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 A6NDX4 124 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 ACTL6BO94805 426 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 OR5AC1P0C628 307 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 UCP1P25874 307 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 HNF4GQ14541 408 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 SLC9A3R2Q15599 337 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 ARSJQ5FYB0 599 aaPredicted RBP11.96□□□□□ -0.49
ACTB-213ENST00000493945 LGI3Q8N145 548 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 OR4A5Q8NH83 315 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 RRNAD1Q96FB5 475 aaKnown RBP11.96□□□□□ -0.49
ACTB-213ENST00000493945 TMEM222Q9H0R3 208 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 CACFD1Q9UGQ2 172 aa11.96□□□□□ -0.49
ACTB-213ENST00000493945 FN1P02751 2386 aaKnown RBP11.96□□□□□ -0.5
ACTB-213ENST00000493945 INMT-MINDY4F8WBC2 141 aa11.95□□□□□ -0.5
ACTB-213ENST00000493945 SFT2D2O95562 160 aa11.95□□□□□ -0.5
ACTB-213ENST00000493945 IGKV1-16P04430 117 aa11.95□□□□□ -0.5
ACTB-213ENST00000493945 RNASE1P07998 156 aaKnown RBP11.95□□□□□ -0.5
ACTB-213ENST00000493945 OR4E1P0C645 316 aa11.95□□□□□ -0.5
ACTB-213ENST00000493945 LPAR6P43657 344 aa11.95□□□□□ -0.5
ACTB-213ENST00000493945 UBE2KP61086 200 aa11.95□□□□□ -0.5
ACTB-213ENST00000493945 RPL30P62888 115 aaKnown RBP11.95□□□□□ -0.5
ACTB-213ENST00000493945 LYG2Q86SG7 212 aa11.95□□□□□ -0.5
ACTB-213ENST00000493945 FAM219AQ8IW50 185 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms