RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 PRAF2O60831 178 aa10□□□□□ -0.81
SNX17-208ENST00000493711 VENTXO95231 258 aa10□□□□□ -0.81
SNX17-208ENST00000493711 MOSP00540 346 aa10□□□□□ -0.81
SNX17-208ENST00000493711 SERPINE2P07093 398 aa10□□□□□ -0.81
SNX17-208ENST00000493711 AKR1C4P17516 323 aa10□□□□□ -0.81
SNX17-208ENST00000493711 PI3P19957 117 aa10□□□□□ -0.81
SNX17-208ENST00000493711 IER3P46695 156 aa10□□□□□ -0.81
SNX17-208ENST00000493711 LGALS7P47929 136 aa10□□□□□ -0.81
SNX17-208ENST00000493711 MECP2P51608 486 aaKnown RBP10□□□□□ -0.81
SNX17-208ENST00000493711 SRPXP78539 464 aa10□□□□□ -0.81
SNX17-208ENST00000493711 EBI3Q14213 229 aa10□□□□□ -0.81
SNX17-208ENST00000493711 Q71RC1 249 aaPredicted RBP10□□□□□ -0.81
SNX17-208ENST00000493711 TMED4Q7Z7H5 227 aa10□□□□□ -0.81
SNX17-208ENST00000493711 BCL6BQ8N143 479 aaPredicted RBP10□□□□□ -0.81
SNX17-208ENST00000493711 DYNAPQ8N1N2 210 aa10□□□□□ -0.81
SNX17-208ENST00000493711 DRAXINQ8NBI3 349 aaPredicted RBP10□□□□□ -0.81
SNX17-208ENST00000493711 OR4C13Q8NGP0 309 aa10□□□□□ -0.81
SNX17-208ENST00000493711 OR51H1Q8NH63 302 aa10□□□□□ -0.81
SNX17-208ENST00000493711 C17orf50Q8WW18 174 aa10□□□□□ -0.81
SNX17-208ENST00000493711 CAPSLQ8WWF8 208 aa10□□□□□ -0.81
SNX17-208ENST00000493711 DDB2Q92466 427 aa10□□□□□ -0.81
SNX17-208ENST00000493711 CFHR4Q92496 578 aa10□□□□□ -0.81
SNX17-208ENST00000493711 FLYWCH2Q96CP2 140 aaKnown RBP10□□□□□ -0.81
SNX17-208ENST00000493711 GALNT14Q96FL9 552 aa10□□□□□ -0.81
SNX17-208ENST00000493711 SSX3Q99909 188 aa10□□□□□ -0.81
SNX17-208ENST00000493711 NAA60Q9H7X0 242 aa10□□□□□ -0.81
SNX17-208ENST00000493711 NUDT15Q9NV35 164 aa10□□□□□ -0.81
SNX17-208ENST00000493711 DOCK11Q5JSL3 2073 aa10□□□□□ -0.81
SNX17-208ENST00000493711 DSCAML1Q8TD84 2053 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 LINC00473A8K010 186 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 ARPC1BO15143 372 aaKnown RBP9.99□□□□□ -0.81
SNX17-208ENST00000493711 FCGR3BO75015 233 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 PEX14O75381 377 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 DHFRP00374 187 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 TRIM16LQ309B1 348 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 TMEM177Q53S58 311 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 C16orf82Q7Z2V1 217 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 SPAG16Q8N0X2 631 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 SIGLECL1Q8N7X8 197 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 OSR1Q8TAX0 266 aaPredicted RBP9.99□□□□□ -0.81
SNX17-208ENST00000493711 C22orf15Q8WYQ4 148 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 TSNAXQ99598 290 aaKnown RBP9.99□□□□□ -0.81
SNX17-208ENST00000493711 MDFIQ99750 246 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 MARVELD1Q9BSK0 173 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 PLEKHA2Q9HB19 425 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 RAB18Q9NP72 206 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 C1RLQ9NZP8 487 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 COMMD9Q9P000 198 aa9.99□□□□□ -0.81
SNX17-208ENST00000493711 ZANQ9Y493 2812 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 INMT-MINDY4F8WBC2 141 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 H3BUX3 64 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 CLDN34H7C241 214 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 M0QZK8 103 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 HPRT1P00492 218 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 HRASP01112 189 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 IFNA2P01563 188 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 IGKV1D-33P01593 117 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 IGKV1-33P01594 117 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 IL5P05113 134 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 SNRNP70P08621 437 aaKnown RBP9.98□□□□□ -0.81
SNX17-208ENST00000493711 RPL30P62888 115 aaKnown RBP9.98□□□□□ -0.81
SNX17-208ENST00000493711 HES1Q14469 280 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 C4orf46Q504U0 113 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 CADM3Q8N126 398 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 ADAD2Q8NCV1 583 aaKnown RBP9.98□□□□□ -0.81
SNX17-208ENST00000493711 IL22RA2Q969J5 263 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 TMEM222Q9H0R3 208 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 GPN1Q9HCN4 374 aaPredicted RBP9.98□□□□□ -0.81
SNX17-208ENST00000493711 ARHGAP32A7KAX9 2087 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 KIAA2026Q5HYC2 2103 aa9.98□□□□□ -0.81
SNX17-208ENST00000493711 TRAV6A0A075B6T7 132 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 SPDEFO95238 335 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 CRYZL1O95825 349 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 OR4E1P0C645 316 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 TMEM11P17152 192 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 VAMP1P23763 118 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 UCP1P25874 307 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 RAB25P57735 213 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 RPS16P62249 146 aaKnown RBP9.97□□□□□ -0.81
SNX17-208ENST00000493711 CCBE1Q6UXH8 406 aaPredicted RBP9.97□□□□□ -0.81
SNX17-208ENST00000493711 GLDNQ6ZMI3 551 aaPredicted RBP9.97□□□□□ -0.81
SNX17-208ENST00000493711 SPATA3Q8NHX4 192 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 TMEM230Q96A57 120 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 EAF1Q96JC9 268 aaPredicted RBP9.97□□□□□ -0.81
SNX17-208ENST00000493711 VPREB3Q9UKI3 123 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 FLVCR2Q9UPI3 526 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 TCF19Q9Y242 345 aa9.97□□□□□ -0.81
SNX17-208ENST00000493711 YLPM1P49750 1951 aaKnown RBP9.97□□□□□ -0.81
SNX17-208ENST00000493711 IGHV3-72A0A0B4J1Y9 119 aa9.96□□□□□ -0.82
SNX17-208ENST00000493711 A6NDX4 124 aa9.96□□□□□ -0.82
SNX17-208ENST00000493711 SHOXO15266 292 aa9.96□□□□□ -0.82
SNX17-208ENST00000493711 CREBL2O60519 120 aaPredicted RBP9.96□□□□□ -0.82
SNX17-208ENST00000493711 OR2F2O95006 317 aa9.96□□□□□ -0.82
SNX17-208ENST00000493711 SFT2D2O95562 160 aa9.96□□□□□ -0.82
SNX17-208ENST00000493711 DUS4LO95620 317 aaKnown RBP9.96□□□□□ -0.82
SNX17-208ENST00000493711 HLA-AP01891 365 aaKnown RBP9.96□□□□□ -0.82
SNX17-208ENST00000493711 NQO2P16083 231 aa9.96□□□□□ -0.82
SNX17-208ENST00000493711 LPAR6P43657 344 aa9.96□□□□□ -0.82
SNX17-208ENST00000493711 RPL15P61313 204 aaKnown RBP9.96□□□□□ -0.82
SNX17-208ENST00000493711 ERVK-16P61578 105 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms