RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 FBXO24O75426 580 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 SPDEFO95238 335 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 HLA-DRB1P01911 266 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 TBPP20226 339 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 GNRHRP30968 328 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 TMEM177Q53S58 311 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 PYDC2Q56P42 97 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 ZNF818PQ6ZRF7 136 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 SGMS2Q8NHU3 365 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 CHPT1Q8WUD6 406 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 CLCC1Q96S66 551 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 GPHA2Q96T91 129 aa11.04□□□□□ -0.64
CCM2-217ENST00000492883 TINAGL1Q9GZM7 467 aaPredicted RBP11.04□□□□□ -0.64
CCM2-217ENST00000492883 FCN1O00602 326 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 GSTZ1O43708 216 aaPredicted RBP11.03□□□□□ -0.64
CCM2-217ENST00000492883 SLC25A17O43808 307 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 RAB3DO95716 219 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 CSF1P09603 554 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 CD28P10747 220 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 SLC35B1P78383 322 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 CATR1Q13166 79 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 EIF4EBP1Q13541 118 aaPredicted RBP11.03□□□□□ -0.64
CCM2-217ENST00000492883 HIST2H2BDQ6DRA6 164 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 STEAP1BQ6NZ63 245 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 LPCAT3Q6P1A2 487 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 ZNF329Q86UD4 541 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 CMTM1Q8IZ96 169 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 STPG2Q8N412 459 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 OR4X2Q8NGF9 303 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 OSR1Q8TAX0 266 aaPredicted RBP11.03□□□□□ -0.64
CCM2-217ENST00000492883 GON7Q9BXV9 100 aa11.03□□□□□ -0.64
CCM2-217ENST00000492883 COL6A5A8TX70 2615 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 SRRM4A7MD48 611 aaKnown RBP11.02□□□□□ -0.65
CCM2-217ENST00000492883 GPR31O00270 319 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 CD74P04233 296 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 VDAC1P21796 283 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 S100GP29377 79 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 KIR2DS2P43631 304 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 CX3CL1P78423 397 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 VMA21Q3ZAQ7 101 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 SPANXN2Q5MJ10 180 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 AADACL3Q5VUY0 350 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 C10orf99Q6UWK7 81 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 CCDC190Q86UF4 302 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 SPAG16Q8N0X2 631 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 ARRDC1Q8N5I2 433 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 POC5Q8NA72 575 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 OR6Q1Q8NGQ2 317 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 OR4S2Q8NH73 311 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 WIPF2Q8TF74 440 aaPredicted RBP11.02□□□□□ -0.65
CCM2-217ENST00000492883 ABHD5Q8WTS1 349 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 THAP7Q9BT49 309 aaPredicted RBP11.02□□□□□ -0.65
CCM2-217ENST00000492883 FXYD6Q9H0Q3 95 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 OR51J1Q9H342 316 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 PARP11Q9NR21 331 aa11.02□□□□□ -0.65
CCM2-217ENST00000492883 TCRBV4S1A1TA0A5B7 111 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 M0QZ24 198 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 PGLYRP1O75594 196 aaPredicted RBP11.01□□□□□ -0.65
CCM2-217ENST00000492883 IGLV2-23P01705 113 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 AKAIN1P0CW23 69 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 PGAM2P15259 253 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 UCP3P55916 312 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 MEF2DQ14814 521 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 SCGB2B2Q4G0G5 96 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 PHLDA2Q53GA4 152 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 PPP1R27Q86WC6 154 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 SLC38A6Q8IZM9 456 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 OR4D10Q8NGI6 311 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 OR51H1Q8NH63 302 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 CITED2Q99967 270 aaPredicted RBP11.01□□□□□ -0.65
CCM2-217ENST00000492883 WSB1Q9Y6I7 421 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 V9GYH0 126 aa11.01□□□□□ -0.65
CCM2-217ENST00000492883 DISC1C4P0D8 188 aa11□□□□□ -0.65
CCM2-217ENST00000492883 ATP6V0E1O15342 81 aa11□□□□□ -0.65
CCM2-217ENST00000492883 CNIH1O95406 144 aa11□□□□□ -0.65
CCM2-217ENST00000492883 CA2P00918 260 aa11□□□□□ -0.65
CCM2-217ENST00000492883 IGF1P05019 195 aa11□□□□□ -0.65
CCM2-217ENST00000492883 CRYGBP07316 175 aa11□□□□□ -0.65
CCM2-217ENST00000492883 PTBP1P26599 531 aaKnown RBP eCLIP11□□□□□ -0.659e-9■■■■■ 35.7
CCM2-217ENST00000492883 BRWD1-AS2P59051 145 aa11□□□□□ -0.65
CCM2-217ENST00000492883 UBE2KP61086 200 aa11□□□□□ -0.65
CCM2-217ENST00000492883 GNB1P62873 340 aa11□□□□□ -0.65
CCM2-217ENST00000492883 CD83Q01151 205 aa11□□□□□ -0.65
CCM2-217ENST00000492883 FXYD3Q14802 87 aa11□□□□□ -0.65
CCM2-217ENST00000492883 NSUN5P1Q3KNT7 163 aa11□□□□□ -0.65
CCM2-217ENST00000492883 KHDC1LQ5JSQ8 128 aa11□□□□□ -0.65
CCM2-217ENST00000492883 ZNF562Q6V9R5 426 aa11□□□□□ -0.65
CCM2-217ENST00000492883 Q8N402 240 aa11□□□□□ -0.65
CCM2-217ENST00000492883 COMMD1Q8N668 190 aa11□□□□□ -0.65
CCM2-217ENST00000492883 TEX45Q8NA69 505 aa11□□□□□ -0.65
CCM2-217ENST00000492883 CD300LFQ8TDQ1 290 aa11□□□□□ -0.65
CCM2-217ENST00000492883 RSRP1Q9BUV0 290 aa11□□□□□ -0.65
CCM2-217ENST00000492883 TPSG1Q9NRR2 321 aa11□□□□□ -0.65
CCM2-217ENST00000492883 TRAV41A0A0B4J266 112 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 ANKRD20A5PA0PJZ0 165 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 A6NHS1 94 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 RAMP3O60896 148 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 HRASP01112 189 aa10.99□□□□□ -0.65
CCM2-217ENST00000492883 OPN1MWP04001 364 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms