RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MT-CO2P00403 227 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 GPX1P07203 203 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 ZNF728P0DKX0 622 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 RPL27AP46776 148 aaKnown RBP1.52□□□□□ -2.17
CLK1-213ENST00000492793 GABRA2P47869 451 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 BLVRAP53004 296 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 MAP3K7CLP57077 242 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 ZNF90Q03938 601 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 PPP1R1AQ13522 171 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 EBPQ15125 230 aaKnown RBP1.52□□□□□ -2.17
CLK1-213ENST00000492793 CST9Q5W186 159 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 FAM19A5Q7Z5A7 132 aaPredicted RBP1.52□□□□□ -2.17
CLK1-213ENST00000492793 SPATA12Q7Z6I5 190 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 LHFPL5Q8TAF8 219 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 SFRP2Q96HF1 295 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 IMP3Q9NV31 184 aaKnown RBP1.52□□□□□ -2.17
CLK1-213ENST00000492793 PLEKHJ1Q9NW61 149 aa1.52□□□□□ -2.17
CLK1-213ENST00000492793 ZNHIT6Q9NWK9 470 aaKnown RBP1.52□□□□□ -2.17
CLK1-213ENST00000492793 POLR3HQ9Y535 204 aaPredicted RBP1.52□□□□□ -2.17
CLK1-213ENST00000492793 THSD7AQ9UPZ6 1657 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 KDM5BQ9UGL1 1544 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 CR1P17927 2039 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 TMED7-TICAM2A0A0A6YYA0 188 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 TRAV41A0A0B4J266 112 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 OR6C6A6NF89 314 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 ITGB1BP1O14713 200 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 TYMSP04818 313 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 UCHL1P09936 223 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 CCR2P41597 374 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 CTBP2P56545 445 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 CXCR4P61073 352 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 PABPC1L2AQ5JQF8 200 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 SAPCD1Q5SSQ6 148 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 RASSF6Q6ZTQ3 369 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 LRRC28Q86X40 367 aaPredicted RBP1.51□□□□□ -2.17
CLK1-213ENST00000492793 RAB2BQ8WUD1 216 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 EEF1AKMT1Q8WVE0 214 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 ZNF471Q9BX82 626 aaPredicted RBP1.51□□□□□ -2.17
CLK1-213ENST00000492793 TTTY13Q9BZ97 58 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 HDHD2Q9H0R4 259 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 HES4Q9HCC6 221 aa1.51□□□□□ -2.17
CLK1-213ENST00000492793 GRIN2BQ13224 1484 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 PLCH2O75038 1416 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 SIPA1L1O43166 1804 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 PRRC2BQ5JSZ5 2229 aaKnown RBP1.5□□□□□ -2.17
CLK1-213ENST00000492793 A0A0A6YYH2 397 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 TRGV5A0A0B4J1U4 118 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 A6NJ64 397 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 NDUFB2O95178 105 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 NPYP01303 97 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 APOEP02649 317 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 TMEM258P61165 79 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 TBPL1P62380 186 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 HOXC5Q00444 222 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 SLC38A11Q08AI6 406 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 KRTAP13-4Q3LI77 160 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 TNFAIP8L2Q6P589 184 aaPredicted RBP1.5□□□□□ -2.17
CLK1-213ENST00000492793 HIST2H3AQ71DI3 136 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 UBL4BQ8N7F7 174 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 ZNF625Q96I27 306 aaPredicted RBP1.5□□□□□ -2.17
CLK1-213ENST00000492793 TIMM21Q9BVV7 248 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 TMEM222Q9H0R3 208 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 FKBP14Q9NWM8 211 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 HHLA3Q9XRX5 114 aa1.5□□□□□ -2.17
CLK1-213ENST00000492793 DENND4BO75064 1496 aaPredicted RBP1.5□□□□□ -2.17
CLK1-213ENST00000492793 PTPRSQ13332 1948 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 BHLHE40O14503 412 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 KLRC4O43908 158 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 SLCO1A2P46721 670 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 AP1S1P61966 158 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 RPS24P62847 133 aaKnown RBP1.49□□□□□ -2.17
CLK1-213ENST00000492793 FAM151BQ6UXP7 276 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 Q6ZTI0 123 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 COMMD7Q86VX2 200 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 Q8N402 240 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 OR51T1Q8NGJ9 327 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 CLDND2Q8NHS1 167 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 SMCR5Q8TEV8 140 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 RNASE6Q93091 150 aaKnown RBP1.49□□□□□ -2.17
CLK1-213ENST00000492793 TMA16Q96EY4 203 aaKnown RBP1.49□□□□□ -2.17
CLK1-213ENST00000492793 LLPHQ9BRT6 129 aaKnown RBP1.49□□□□□ -2.17
CLK1-213ENST00000492793 MAP1LC3AQ9H492 121 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 CXorf21Q9HAI6 301 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 FGFR1OP2Q9NVK5 253 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 DKKL1Q9UK85 242 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 FAM215AQ9Y5M1 114 aa1.49□□□□□ -2.17
CLK1-213ENST00000492793 PCDH15Q96QU1 1955 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 NUMA1Q14980 2115 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 FN1P02751 2386 aaKnown RBP1.48□□□□□ -2.17
CLK1-213ENST00000492793 TMSB15BA0A087X1C1 80 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 TMEM269A0A1B0GVZ9 245 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 OCM2P0CE71 109 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 COX5BP10606 129 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 CD24P25063 80 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 DDTP30046 118 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 RBM11P57052 281 aaKnown RBP1.48□□□□□ -2.17
CLK1-213ENST00000492793 FXYD7P58549 80 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 TAS2R20P59543 309 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 GLO1Q04760 184 aa1.48□□□□□ -2.17
CLK1-213ENST00000492793 MED21Q13503 144 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms