RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 ASCL1P50553 236 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 GNB2P62879 340 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 TLE4Q04727 773 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 ARL16Q0P5N6 197 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 EDDM3AQ14507 147 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 IZUMO4Q1ZYL8 232 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 NCR3LG1Q68D85 454 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 VHLLQ6RSH7 139 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 TCF23Q7RTU1 214 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 ZNF429Q86V71 674 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 TPRX1Q8N7U7 411 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 C8orf31Q8N9H6 132 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 ZNRF1Q8ND25 227 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 OR10G4Q8NGN3 311 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 RFESDQ8TAC1 157 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 PINX1Q96BK5 328 aaKnown RBP8.87□□□□□ -0.99
USP4-214ENST00000491791 RBMXL1Q96E39 390 aaKnown RBP8.87□□□□□ -0.99
USP4-214ENST00000491791 NARS2Q96I59 477 aaKnown RBP8.87□□□□□ -0.99
USP4-214ENST00000491791 ZNF251Q9BRH9 671 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 EGLN1Q9GZT9 426 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 RBKSQ9H477 322 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 KIAA1456Q9P272 454 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 GNG12Q9UBI6 72 aa8.87□□□□□ -0.99
USP4-214ENST00000491791 TRGV10A0A0A0MS01 117 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 hADV38S2A0JD32 116 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 IL6RP08887 468 aaPredicted RBP8.86□□□□□ -0.99
USP4-214ENST00000491791 SFTA3P0C7M3 94 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 CD80P33681 288 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 G6PCP35575 357 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 THBS3P49746 956 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 ZNF134P52741 427 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 FAM53AQ6NSI3 398 aaPredicted RBP8.86□□□□□ -0.99
USP4-214ENST00000491791 TMEM182Q6ZP80 229 aaPredicted RBP8.86□□□□□ -0.99
USP4-214ENST00000491791 H2BFWTQ7Z2G1 175 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 C1orf87Q8N0U7 546 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 ZNF808Q8N4W9 903 aaPredicted RBP8.86□□□□□ -0.99
USP4-214ENST00000491791 TMEM217Q8N7C4 229 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 BOLLQ8N9W6 283 aaKnown RBP8.86□□□□□ -0.99
USP4-214ENST00000491791 ZNF596Q8TC21 504 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 R3HDM4Q96D70 268 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 WFIKKN1Q96NZ8 548 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 GGACTQ9BVM4 153 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 WDR61Q9GZS3 305 aaKnown RBP8.86□□□□□ -0.99
USP4-214ENST00000491791 ESRP2Q9H6T0 727 aaKnown RBP8.86□□□□□ -0.99
USP4-214ENST00000491791 IDI2-AS1Q9NZ38 188 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 KAAG1Q9UBP8 84 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 PRELID3BQ9Y3B1 194 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 FAM96BQ9Y3D0 163 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 LINC00312Q9Y6C7 94 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 DIDO1Q9BTC0 2240 aaKnown RBP8.86□□□□□ -0.99
USP4-214ENST00000491791 KIAA2026Q5HYC2 2103 aa8.86□□□□□ -0.99
USP4-214ENST00000491791 DSCAML1Q8TD84 2053 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 IGHV3-43A0A0B4J1X8 118 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 NKX6-3A6NJ46 265 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 MARCH11A6NNE9 402 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 SHISA9B4DS77 424 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 TMEM178BH3BS89 294 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 CYB5R3P00387 301 aaPredicted RBP8.85□□□□□ -0.99
USP4-214ENST00000491791 IGHV3-43DP0DP04 118 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 NQO2P16083 231 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 FHITP49789 147 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 SPCS3P61009 180 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 AKR1C1Q04828 323 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 ZNF616Q08AN1 781 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 ZNF816Q0VGE8 651 aaPredicted RBP8.85□□□□□ -0.99
USP4-214ENST00000491791 CT45A1Q5HYN5 189 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 ZNF506Q5JVG8 444 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 AKR1C8PQ5T2L2 129 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 SLC25A48Q6ZT89 311 aaKnown RBP8.85□□□□□ -0.99
USP4-214ENST00000491791 WFDC8Q8IUA0 241 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 DMRTC2Q8IXT2 367 aaPredicted RBP8.85□□□□□ -0.99
USP4-214ENST00000491791 CT45A3Q8NHU0 189 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 FAM213BQ8TBF2 198 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 SCGB1C1Q8TD33 95 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 RNASE6Q93091 150 aaKnown RBP8.85□□□□□ -0.99
USP4-214ENST00000491791 OR4C12Q96R67 309 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 ABHD14AQ9BUJ0 271 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 SLC35B3Q9H1N7 401 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 MS4A5Q9H3V2 200 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 TUBA4BQ9H853 241 aa8.85□□□□□ -0.99
USP4-214ENST00000491791 UNKLQ9H9P5 680 aaKnown RBP8.85□□□□□ -0.99
USP4-214ENST00000491791 RPUSD1Q9UJJ7 312 aaKnown RBP8.85□□□□□ -0.99
USP4-214ENST00000491791 PPIAL4EA0A075B759 164 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 B9A039 149 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 PPIAL4DF5H284 164 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 NDUFA2O43678 99 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 DSCAMO60469 2012 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 ARG1P05089 322 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 METTL15P1P0C7V9 234 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 PPIAL4FP0DN26 164 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 IAPPP10997 89 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 CASP6P55212 293 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 EDDM3BP56851 147 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 RAB2AP61019 212 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 SLC38A11Q08AI6 406 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 TMEM267Q0VDI3 215 aaPredicted RBP8.84□□□□□ -0.99
USP4-214ENST00000491791 FAM71F2Q6NXP2 309 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 CLRN3Q8NCR9 226 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 OR4S2Q8NH73 311 aa8.84□□□□□ -0.99
USP4-214ENST00000491791 DTD1Q8TEA8 209 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms