RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 BLOC1S6Q9UL45 172 aa10.46□□□□□ -0.73
COL6A3-211ENST00000491233 RBM7Q9Y580 266 aaKnown RBP10.46□□□□□ -0.73
COL6A3-211ENST00000491233 STAB2Q8WWQ8 2551 aa10.45□□□□□ -0.74
COL6A3-211ENST00000491233 IGKV1D-8A0A087WSZ0 117 aa10.45□□□□□ -0.74
COL6A3-211ENST00000491233 A0A0G2JLM5 398 aa10.45□□□□□ -0.74
COL6A3-211ENST00000491233 IGLV1-51P01701 117 aa10.45□□□□□ -0.74
COL6A3-211ENST00000491233 APELAP0DMC3 54 aa10.45□□□□□ -0.74
COL6A3-211ENST00000491233 RAB3BP20337 219 aa10.45□□□□□ -0.74
COL6A3-211ENST00000491233 HSPA13P48723 471 aa10.45□□□□□ -0.74
COL6A3-211ENST00000491233 TAGLNQ01995 201 aaKnown RBP10.45□□□□□ -0.74
COL6A3-211ENST00000491233 ANKRD13BQ86YJ7 626 aa10.45□□□□□ -0.74
COL6A3-211ENST00000491233 COA4Q9NYJ1 87 aa10.45□□□□□ -0.74
COL6A3-211ENST00000491233 TRDV1A0A1B0GX56 115 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 SMIM30A4D0T7 59 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 METTL21EPA6NDL7 271 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 SRRM4A7MD48 611 aaKnown RBP10.44□□□□□ -0.74
COL6A3-211ENST00000491233 CRYZL1O95825 349 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 RRASP10301 218 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 TALDO1P37837 337 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 MRGPRG-AS1Q2M3A8 158 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 VMA21Q3ZAQ7 101 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 C22orf42Q6IC83 251 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 NR2C2APQ86WQ0 139 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 H1FOOQ8IZA3 346 aaPredicted RBP10.44□□□□□ -0.74
COL6A3-211ENST00000491233 MUC7Q8TAX7 377 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 DDB2Q92466 427 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 ADTRPQ96IZ2 230 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 TMEM68Q96MH6 324 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 PHB2Q99623 299 aa10.44□□□□□ -0.74
COL6A3-211ENST00000491233 TINAGL1Q9GZM7 467 aaPredicted RBP10.44□□□□□ -0.74
COL6A3-211ENST00000491233 LINC00473A8K010 186 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 BRI3O95415 125 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 TRBV12-3P01733 135 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 AADACP22760 399 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 DUTP33316 252 aaKnown RBP10.43□□□□□ -0.74
COL6A3-211ENST00000491233 UBE2KP61086 200 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 DYRK1AQ13627 763 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 TNXAQ16473 311 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 IDO2Q6ZQW0 420 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 Q6ZS49 121 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 SGPP2Q8IWX5 399 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 OR9G4Q8NGQ1 327 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 ATG5Q9H1Y0 275 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 ZMAT4Q9H898 229 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 ADAM30Q9UKF2 790 aa10.43□□□□□ -0.74
COL6A3-211ENST00000491233 ELF5Q9UKW6 265 aaPredicted RBP10.43□□□□□ -0.74
COL6A3-211ENST00000491233 TNCP24821 2201 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 ERICH4A6NGS2 130 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 J3QRK9 145 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 MPPED1O15442 326 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 RBMXL2O75526 392 aaKnown RBP10.42□□□□□ -0.74
COL6A3-211ENST00000491233 IGHV4-30-4P0DP06 118 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 DTYMKP23919 212 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 SYNJ2BPP57105 145 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 GABARAPL2P60520 117 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 KLF5Q13887 457 aaPredicted RBP10.42□□□□□ -0.74
COL6A3-211ENST00000491233 PRSS8Q16651 343 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 ZNF343Q6P1L6 599 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 Q8N1Y9 231 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 TEX45Q8NA69 505 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 ADAD2Q8NCV1 583 aaKnown RBP10.42□□□□□ -0.74
COL6A3-211ENST00000491233 OSR1Q8TAX0 266 aaPredicted RBP10.42□□□□□ -0.74
COL6A3-211ENST00000491233 SRSF12Q8WXF0 261 aaKnown RBP10.42□□□□□ -0.74
COL6A3-211ENST00000491233 ACOT12Q8WYK0 555 aa10.42□□□□□ -0.74
COL6A3-211ENST00000491233 PEF1Q9UBV8 284 aaKnown RBP10.42□□□□□ -0.74
COL6A3-211ENST00000491233 MSGN1A6NI15 193 aa10.41□□□□□ -0.74
COL6A3-211ENST00000491233 OR9G9P0C7N8 305 aa10.41□□□□□ -0.74
COL6A3-211ENST00000491233 SAA1P0DJI8 122 aaPredicted RBP10.41□□□□□ -0.74
COL6A3-211ENST00000491233 GALP22466 123 aa10.41□□□□□ -0.74
COL6A3-211ENST00000491233 ARL6IP1Q15041 203 aa10.41□□□□□ -0.74
COL6A3-211ENST00000491233 CASC10Q5T4H9 136 aa10.41□□□□□ -0.74
COL6A3-211ENST00000491233 IL34Q6ZMJ4 242 aa10.41□□□□□ -0.74
COL6A3-211ENST00000491233 USMG5Q96IX5 58 aa10.41□□□□□ -0.74
COL6A3-211ENST00000491233 TM2D3Q9BRN9 247 aa10.41□□□□□ -0.74
COL6A3-211ENST00000491233 CENPOQ9BU64 300 aa10.41□□□□□ -0.74
COL6A3-211ENST00000491233 NFYAP23511 347 aaPredicted RBP10.4□□□□□ -0.74
COL6A3-211ENST00000491233 PSMB9P28065 219 aa10.4□□□□□ -0.74
COL6A3-211ENST00000491233 EXOSC2Q13868 293 aaKnown RBP10.4□□□□□ -0.74
COL6A3-211ENST00000491233 CDK10Q15131 360 aa10.4□□□□□ -0.74
COL6A3-211ENST00000491233 RPEL1Q2QD12 228 aa10.4□□□□□ -0.74
COL6A3-211ENST00000491233 OR2B11Q5JQS5 317 aa10.4□□□□□ -0.74
COL6A3-211ENST00000491233 C10orf55Q5SWW7 151 aa10.4□□□□□ -0.74
COL6A3-211ENST00000491233 KCTD9Q7L273 389 aa10.4□□□□□ -0.74
COL6A3-211ENST00000491233 ZNF645Q8N7E2 425 aa10.4□□□□□ -0.74
COL6A3-211ENST00000491233 NUDCD2Q8WVJ2 157 aa10.4□□□□□ -0.74
COL6A3-211ENST00000491233 ZNF430Q9H8G1 570 aaPredicted RBP10.4□□□□□ -0.74
COL6A3-211ENST00000491233 C19orf73Q9NVV2 129 aa10.4□□□□□ -0.74
COL6A3-211ENST00000491233 RAB26Q9ULW5 256 aa10.4□□□□□ -0.74
COL6A3-211ENST00000491233 DYNC2H1Q8NCM8 4307 aaKnown RBP10.39□□□□□ -0.75
COL6A3-211ENST00000491233 DNAH7Q8WXX0 4024 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 TMEM235A6NFC5 223 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 NOTOA8MTQ0 251 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 A8MZ25 164 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 H0Y980 276 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 CREBL2O60519 120 aaPredicted RBP10.39□□□□□ -0.75
COL6A3-211ENST00000491233 FCGR3BO75015 233 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 PRH1P02810 166 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 CD36P16671 472 aa10.39□□□□□ -0.75
COL6A3-211ENST00000491233 RPL30P62888 115 aaKnown RBP10.39□□□□□ -0.75
COL6A3-211ENST00000491233 RHOGP84095 191 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms