RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 RPS23P62266 143 aaKnown RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST1H2BCP62807 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 RPP30P78346 268 aaKnown RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CCL7P80098 99 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 LCN2P80188 198 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PRDX4Q13162 271 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 MSMO1Q15800 293 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HAGHQ16775 308 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST2H2BEQ16778 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 BSXQ3C1V8 233 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ACOT6Q3I5F7 207 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 Q3ZCU0 254 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 COX19Q49B96 90 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PHLDA2Q53GA4 152 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 IGSF11Q5DX21 431 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 NMSQ5H8A3 153 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 FREM1Q5H8C1 2179 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PYY3Q5JQD4 70 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM31Q5JXX7 168 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PHYHD1Q5SRE7 291 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 NCMAPQ5T1S8 102 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 LCE1EQ5T753 118 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 WDR25Q64LD2 544 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 TCEAL6Q6IPX3 200 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC25A24Q6NUK1 477 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF880Q6PDB4 577 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM182Q6ZP80 229 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 C16orf47Q6ZP98 133 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 LANCL3Q6ZV70 420 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC25A26Q70HW3 274 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 WDFY1Q8IWB7 410 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ODF3L1Q8IXM7 274 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 C1orf174Q8IYL3 243 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PRSS58Q8IYP2 241 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM123Q8N131 208 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 FAM58AQ8N1B3 248 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST3H2BBQ8N257 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 FGFRL1Q8N441 504 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SPEM1Q8N4L4 309 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 DEFB119Q8N690 84 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC35G3Q8N808 338 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF709Q8N972 641 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 WDR31Q8NA23 367 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF383Q8NA42 475 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ZFP62Q8NB50 900 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HSD17B11Q8NBQ5 300 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10G3Q8NGC4 313 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10V1Q8NGI7 309 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR51G1Q8NGK1 321 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10D4PQ8NGN7 298 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2T10Q8NGZ9 312 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR5R1Q8NH85 324 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2AE1Q8NHA4 323 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SVIPQ8NHG7 77 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 RNASE11Q8TAA1 199 aaKnown RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CA5BP1Q8WTZ4 195 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 RLN3Q8WXF3 142 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PSMF1Q92530 271 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 FRZBQ92765 325 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CORO2AQ92828 525 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST1H2BHQ93079 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 LHX4Q969G2 390 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ISOC2Q96AB3 205 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 NABP1Q96AH0 204 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 APOBEC3DQ96AK3 386 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM45BQ96B21 275 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CLDN23Q96B33 292 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 BSCL2Q96G97 398 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 GMPPAQ96IJ6 420 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PACRGQ96M98 296 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SIGLEC12Q96PQ1 595 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CIB3Q96Q77 187 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR5B12Q96R08 314 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR4C12Q96R67 309 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 TP53RKQ96S44 253 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ATP5SQ99766 215 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST1H2BNQ99877 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST1H2BMQ99879 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 AGMATQ9BSE5 352 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 C2orf88Q9BSF0 95 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 C20orf24Q9BUV8 137 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 GPR61Q9BZJ8 451 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ULBP2Q9BZM5 246 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PKIBQ9C010 78 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2H1Q9GZK4 316 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 MAP1LC3BQ9GZQ8 125 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PARP12Q9H0J9 701 aaKnown RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 MAGT1Q9H0U3 335 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CDH20Q9HBT6 801 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PROK2Q9HC23 129 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CRLF2Q9HC73 371 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SH2D2AQ9NP31 389 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CCL28Q9NRJ3 127 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 GPR173Q9NS66 373 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PSENENQ9NZ42 101 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 MTCH1Q9NZJ7 389 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 LOXL2Q9Y4K0 774 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 RNF115Q9Y4L5 304 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 WIPI2Q9Y4P8 454 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms