RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 SPIN2BQ9BPZ2 258 aa14.76□□□□□ -0.05
UPK3B-205ENST00000490360 C12orf4Q9NQ89 552 aa14.76□□□□□ -0.05
UPK3B-205ENST00000490360 A0A0J9YWU9 116 aa14.75□□□□□ -0.05
UPK3B-205ENST00000490360 BPNT1O95861 308 aa14.75□□□□□ -0.05
UPK3B-205ENST00000490360 SCTP09683 121 aa14.75□□□□□ -0.05
UPK3B-205ENST00000490360 SRMP19623 302 aa14.75□□□□□ -0.05
UPK3B-205ENST00000490360 CBLN1P23435 193 aa14.75□□□□□ -0.05
UPK3B-205ENST00000490360 C1orf100Q5SVJ3 147 aa14.75□□□□□ -0.05
UPK3B-205ENST00000490360 ZNF57Q68EA5 555 aaPredicted RBP14.75□□□□□ -0.05
UPK3B-205ENST00000490360 SLC25A42Q86VD7 318 aa14.75□□□□□ -0.05
UPK3B-205ENST00000490360 GPHB5Q86YW7 130 aa14.75□□□□□ -0.05
UPK3B-205ENST00000490360 SRSF12Q8WXF0 261 aaKnown RBP14.75□□□□□ -0.05
UPK3B-205ENST00000490360 Q9N2K0 584 aa14.75□□□□□ -0.05
UPK3B-205ENST00000490360 RDH8Q9NYR8 311 aa14.75□□□□□ -0.05
UPK3B-205ENST00000490360 APELAP0DMC3 54 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 APOC4P55056 127 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 UBE2KP61086 200 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 TNXAQ16473 311 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 PRSS8Q16651 343 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 LYG2Q86SG7 212 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 C10orf67Q8IYJ2 551 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 ZNF555Q8NEP9 628 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 PHYHIPQ92561 330 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 NICN1Q9BSH3 213 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 URM1Q9BTM9 101 aaKnown RBP14.74□□□□□ -0.05
UPK3B-205ENST00000490360 AK3Q9UIJ7 227 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 HSF4Q9ULV5 492 aa14.74□□□□□ -0.05
UPK3B-205ENST00000490360 UBE2CO00762 179 aa14.73□□□□□ -0.05
UPK3B-205ENST00000490360 ACTL6BO94805 426 aa14.73□□□□□ -0.05
UPK3B-205ENST00000490360 CELP19835 753 aa14.73□□□□□ -0.05
UPK3B-205ENST00000490360 UNC119Q13432 240 aa14.73□□□□□ -0.05
UPK3B-205ENST00000490360 TTC9CQ8N5M4 171 aa14.73□□□□□ -0.05
UPK3B-205ENST00000490360 PNMA8CA0A1B0GUJ8 204 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 SRRM4A7MD48 611 aaKnown RBP14.72□□□□□ -0.05
UPK3B-205ENST00000490360 TMEM14DPA8MWL7 114 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 TRDCB7Z8K6 153 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 SPRY2O43597 315 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 ZNF45Q02386 682 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 MRGPRG-AS1Q2M3A8 158 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 C15orf32Q32M92 178 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 FAM106AQ4KMX7 169 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 OR4A47Q6IF82 309 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 TMEM61Q8N0U2 210 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 GGHQ92820 318 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 ADTRPQ96IZ2 230 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 SDHAF2Q9NX18 166 aa14.72□□□□□ -0.05
UPK3B-205ENST00000490360 TRAV25A0A0B4J276 109 aa14.71□□□□□ -0.05
UPK3B-205ENST00000490360 EFCAB10A6NFE3 127 aa14.71□□□□□ -0.05
UPK3B-205ENST00000490360 QRFPP83859 136 aa14.71□□□□□ -0.05
UPK3B-205ENST00000490360 FAM89BQ8N5H3 189 aa14.71□□□□□ -0.05
UPK3B-205ENST00000490360 OR4A4PQ8NGN8 299 aa14.71□□□□□ -0.05
UPK3B-205ENST00000490360 OSR1Q8TAX0 266 aaPredicted RBP14.71□□□□□ -0.05
UPK3B-205ENST00000490360 GATAD1Q8WUU5 269 aa14.71□□□□□ -0.05
UPK3B-205ENST00000490360 ACOT12Q8WYK0 555 aa14.71□□□□□ -0.05
UPK3B-205ENST00000490360 HDHD3Q9BSH5 251 aaPredicted RBP14.71□□□□□ -0.05
UPK3B-205ENST00000490360 OR2D2Q9H210 308 aa14.71□□□□□ -0.05
UPK3B-205ENST00000490360 ZNF257Q9Y2Q1 563 aa14.71□□□□□ -0.05
UPK3B-205ENST00000490360 DMRT1Q9Y5R6 373 aa14.71□□□□□ -0.05
UPK3B-205ENST00000490360 IGKV1-6A0A0C4DH72 117 aa14.7□□□□□ -0.06
UPK3B-205ENST00000490360 A8MWP6 167 aa14.7□□□□□ -0.06
UPK3B-205ENST00000490360 PPP5D1E7EU14 171 aa14.7□□□□□ -0.06
UPK3B-205ENST00000490360 OR2C1O95371 312 aa14.7□□□□□ -0.06
UPK3B-205ENST00000490360 DIRAS3O95661 229 aa14.7□□□□□ -0.06
UPK3B-205ENST00000490360 PRH1P02810 166 aa14.7□□□□□ -0.06
UPK3B-205ENST00000490360 MS4A15Q8N5U1 240 aa14.7□□□□□ -0.06
UPK3B-205ENST00000490360 OR6M1Q8NGM8 313 aa14.7□□□□□ -0.06
UPK3B-205ENST00000490360 CMSS1Q9BQ75 279 aaKnown RBP14.7□□□□□ -0.06
UPK3B-205ENST00000490360 LPAR5Q9H1C0 372 aa14.7□□□□□ -0.06
UPK3B-205ENST00000490360 A0A0A6YYD4 124 aa14.69□□□□□ -0.06
UPK3B-205ENST00000490360 ERICH4A6NGS2 130 aa14.69□□□□□ -0.06
UPK3B-205ENST00000490360 SOCS1O15524 211 aa14.69□□□□□ -0.06
UPK3B-205ENST00000490360 CD37P11049 281 aa14.69□□□□□ -0.06
UPK3B-205ENST00000490360 ST3GAL4Q11206 333 aa14.69□□□□□ -0.06
UPK3B-205ENST00000490360 TM4SF20Q53R12 229 aa14.69□□□□□ -0.06
UPK3B-205ENST00000490360 LRRTM1Q86UE6 522 aa14.69□□□□□ -0.06
UPK3B-205ENST00000490360 MMD2Q8IY49 270 aa14.69□□□□□ -0.06
UPK3B-205ENST00000490360 OR10J5Q8NHC4 309 aa14.69□□□□□ -0.06
UPK3B-205ENST00000490360 MARC2Q969Z3 335 aa14.69□□□□□ -0.06
UPK3B-205ENST00000490360 HECTD4Q9Y4D8 3996 aa14.68□□□□□ -0.06
UPK3B-205ENST00000490360 DEDDO75618 318 aa14.68□□□□□ -0.06
UPK3B-205ENST00000490360 OR2J3O76001 311 aa14.68□□□□□ -0.06
UPK3B-205ENST00000490360 WNT4P56705 351 aa14.68□□□□□ -0.06
UPK3B-205ENST00000490360 EWSR1Q01844 656 aaKnown RBP eCLIP14.68□□□□□ -0.06
UPK3B-205ENST00000490360 ACSM3Q53FZ2 586 aa14.68□□□□□ -0.06
UPK3B-205ENST00000490360 RBM48Q5RL73 367 aaKnown RBP14.68□□□□□ -0.06
UPK3B-205ENST00000490360 SLC38A6Q8IZM9 456 aa14.68□□□□□ -0.06
UPK3B-205ENST00000490360 UXS1Q8NBZ7 420 aa14.68□□□□□ -0.06
UPK3B-205ENST00000490360 CENPOQ9BU64 300 aa14.68□□□□□ -0.06
UPK3B-205ENST00000490360 SMPD3Q9NY59 655 aaPredicted RBP14.68□□□□□ -0.06
UPK3B-205ENST00000490360 MLXQ9UH92 298 aa14.68□□□□□ -0.06
UPK3B-205ENST00000490360 DNAH10Q8IVF4 4471 aa14.67□□□□□ -0.06
UPK3B-205ENST00000490360 KIR2DL5BA0A0G2JN68 375 aa14.67□□□□□ -0.06
UPK3B-205ENST00000490360 KIR2DL5BA0A0G2JPC4 375 aa14.67□□□□□ -0.06
UPK3B-205ENST00000490360 ZNF320A2RRD8 509 aa14.67□□□□□ -0.06
UPK3B-205ENST00000490360 TMEM213A2RRL7 107 aa14.67□□□□□ -0.06
UPK3B-205ENST00000490360 MYL12BO14950 172 aa14.67□□□□□ -0.06
UPK3B-205ENST00000490360 SCAF4O95104 1147 aaKnown RBP14.67□□□□□ -0.06
UPK3B-205ENST00000490360 CRYZL1O95825 349 aa14.67□□□□□ -0.06
UPK3B-205ENST00000490360 HLA-AP01891 365 aaKnown RBP14.67□□□□□ -0.06
UPK3B-205ENST00000490360 EDN2P20800 178 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms