RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 UPF3BQ9BZI7 483 aaKnown RBP1.31□□□□□ -2.2
CD46-216ENST00000490278 IMP3Q9NV31 184 aaKnown RBP1.31□□□□□ -2.2
CD46-216ENST00000490278 TAAR3PQ9P1P4 343 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 CRCT1Q9UGL9 99 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 HHLA3Q9XRX5 114 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 POLR3HQ9Y535 204 aaPredicted RBP1.31□□□□□ -2.2
CD46-216ENST00000490278 GRIN2BQ13224 1484 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 DSCAMO60469 2012 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 MDC1Q14676 2089 aaKnown RBP1.3□□□□□ -2.2
CD46-216ENST00000490278 A0A087WUU8 490 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 TMSB15BA0A087X1C1 80 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 RFPL4AA6NLU0 287 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 RFPL4AL1F8VTS6 287 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 TXNDC9O14530 226 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 HLA-DQB2P05538 268 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 UGT2B7P16662 529 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 MGAT3Q09327 533 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 JOSD1Q15040 202 aaPredicted RBP1.3□□□□□ -2.2
CD46-216ENST00000490278 PDPK2PQ6A1A2 396 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 Q6ZRN7 208 aaPredicted RBP1.3□□□□□ -2.2
CD46-216ENST00000490278 SPACA4Q8TDM5 124 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 RNASE6Q93091 150 aaKnown RBP1.3□□□□□ -2.2
CD46-216ENST00000490278 C12orf43Q96C57 262 aaKnown RBP1.3□□□□□ -2.2
CD46-216ENST00000490278 KRTAP4-1Q9BYQ7 146 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 DERL2Q9GZP9 239 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 HES4Q9HCC6 221 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 ZNF532Q9HCE3 1301 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 RGS12O14924 1447 aa1.3□□□□□ -2.2
CD46-216ENST00000490278 TMED7-TICAM2A0A0A6YYA0 188 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 ITGB1BP1O14713 200 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 CD40LGP29965 261 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 IDH3GP51553 393 aaPredicted RBP1.29□□□□□ -2.2
CD46-216ENST00000490278 CXCR4P61073 352 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 PLPPR5Q32ZL2 321 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 NAA40Q86UY6 237 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 TMEM251Q8N6I4 163 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 PACRGLQ8N7B6 248 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 OR13C8Q8NGS7 320 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 ZNF563Q8TA94 476 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 ANKRD36BP1Q96IX9 119 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 KCTD7Q96MP8 289 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 NMNAT3Q96T66 252 aa1.29□□□□□ -2.2
CD46-216ENST00000490278 CHD5Q8TDI0 1954 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 C9JCJ5 164 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 F5H768 121 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 COCHO43405 550 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 CTBP2P56545 445 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 TMEM258P61165 79 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 GLO1Q04760 184 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 ZNF791Q3KP31 576 aaPredicted RBP1.28□□□□□ -2.2
CD46-216ENST00000490278 OR10K2Q6IF99 312 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 LRRC28Q86X40 367 aaPredicted RBP1.28□□□□□ -2.2
CD46-216ENST00000490278 FAM9CQ8IZT9 166 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 Q8N402 240 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 C10orf126Q8N4M7 172 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 DEFB119Q8N690 84 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 TTTY13Q9BZ97 58 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 PLEKHJ1Q9NW61 149 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 BABAM2Q9NXR7 383 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 DOK5Q9P104 306 aa1.28□□□□□ -2.2
CD46-216ENST00000490278 NYNRINQ9P2P1 1898 aaKnown RBP1.28□□□□□ -2.2
CD46-216ENST00000490278 CR1P17927 2039 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 SCN9AQ15858 1988 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 DICER1Q9UPY3 1922 aaKnown RBP1.27□□□□□ -2.21
CD46-216ENST00000490278 COL4A1P02462 1669 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 IGHV3-64A0A075B6Q5 118 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 TRGV2A0A075B6R0 118 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 C1orf232A0A0U1RR37 186 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 IGKV2-29A2NJV5 120 aaPredicted RBP1.27□□□□□ -2.21
CD46-216ENST00000490278 ZNF705FA8MVS1 300 aaPredicted RBP1.27□□□□□ -2.21
CD46-216ENST00000490278 GOLGA8KD6RF30 607 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 GOLGA8MH3BSY2 632 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 YEATS4O95619 227 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 DDTP30046 118 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 CCR2P41597 374 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 CDC34P49427 236 aaPredicted RBP1.27□□□□□ -2.21
CD46-216ENST00000490278 FXYD7P58549 80 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 TAS2R20P59543 309 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 FKBP1AP62942 108 aaKnown RBP1.27□□□□□ -2.21
CD46-216ENST00000490278 SLC38A11Q08AI6 406 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 MED21Q13503 144 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 COA5Q86WW8 74 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 GPHB5Q86YW7 130 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 UBL4BQ8N7F7 174 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 OR8B12Q8NGG6 310 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 OR51T1Q8NGJ9 327 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 ZNF675Q8TD23 568 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 EEF1AKMT1Q8WVE0 214 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 CMTM5Q96DZ9 223 aa1.27□□□□□ -2.21
CD46-216ENST00000490278 ZNHIT6Q9NWK9 470 aaKnown RBP1.27□□□□□ -2.21
CD46-216ENST00000490278 REREQ9P2R6 1566 aa1.26□□□□□ -2.21
CD46-216ENST00000490278 SSNA1O43805 119 aa1.26□□□□□ -2.21
CD46-216ENST00000490278 KLRC4O43908 158 aa1.26□□□□□ -2.21
CD46-216ENST00000490278 APOMO95445 188 aa1.26□□□□□ -2.21
CD46-216ENST00000490278 HLA-DRAP01903 254 aa1.26□□□□□ -2.21
CD46-216ENST00000490278 MIAQ16674 131 aa1.26□□□□□ -2.21
CD46-216ENST00000490278 SAPCD1Q5SSQ6 148 aa1.26□□□□□ -2.21
CD46-216ENST00000490278 CST9Q5W186 159 aa1.26□□□□□ -2.21
CD46-216ENST00000490278 TNFAIP8L2Q6P589 184 aaPredicted RBP1.26□□□□□ -2.21
CD46-216ENST00000490278 Q6ZSA8 131 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms