RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 HLA-AP01891 365 aaKnown RBP10.45□□□□□ -0.74
VARS-227ENST00000489979 MAPK3P27361 379 aaPredicted RBP10.45□□□□□ -0.74
VARS-227ENST00000489979 QRFPP83859 136 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 INSL4Q14641 139 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 PRSS8Q16651 343 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 TMEM177Q53S58 311 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 C1orf100Q5SVJ3 147 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 LRRTM1Q86UE6 522 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 ZNF555Q8NEP9 628 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 SRSF12Q8WXF0 261 aaKnown RBP10.45□□□□□ -0.74
VARS-227ENST00000489979 CACNG8Q8WXS5 425 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 THRSPQ92748 146 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 SDHAF2Q9NX18 166 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 DEDDO75618 318 aa10.44□□□□□ -0.74
VARS-227ENST00000489979 CD1AP06126 327 aa10.44□□□□□ -0.74
VARS-227ENST00000489979 CBX3Q13185 183 aa10.44□□□□□ -0.74
VARS-227ENST00000489979 IDO2Q6ZQW0 420 aa10.44□□□□□ -0.74
VARS-227ENST00000489979 TEX45Q8NA69 505 aa10.44□□□□□ -0.74
VARS-227ENST00000489979 OR52B4Q8NGK2 314 aa10.44□□□□□ -0.74
VARS-227ENST00000489979 C5orf30Q96GV9 206 aa10.44□□□□□ -0.74
VARS-227ENST00000489979 LPAR5Q9H1C0 372 aa10.44□□□□□ -0.74
VARS-227ENST00000489979 OR2D2Q9H210 308 aa10.44□□□□□ -0.74
VARS-227ENST00000489979 KLK5Q9Y337 293 aaPredicted RBP10.44□□□□□ -0.74
VARS-227ENST00000489979 DMRT1Q9Y5R6 373 aa10.44□□□□□ -0.74
VARS-227ENST00000489979 GGCTO75223 188 aaKnown RBP10.43□□□□□ -0.74
VARS-227ENST00000489979 OR2J3O76001 311 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 OR2C1O95371 312 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 CD3GP09693 182 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 SRMP19623 302 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 UBE2KP61086 200 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 TAGLNQ01995 201 aaKnown RBP10.43□□□□□ -0.74
VARS-227ENST00000489979 TNFRSF9Q07011 255 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 ST3GAL4Q11206 333 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 RTL8BQ17RB0 113 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 C15orf32Q32M92 178 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 VMA21Q3ZAQ7 101 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 RBM48Q5RL73 367 aaKnown RBP10.43□□□□□ -0.74
VARS-227ENST00000489979 ZNF57Q68EA5 555 aaPredicted RBP10.43□□□□□ -0.74
VARS-227ENST00000489979 LYG2Q86SG7 212 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 TMEM61Q8N0U2 210 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 NECAP1Q8NC96 275 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 ACOT12Q8WYK0 555 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 C12orf4Q9NQ89 552 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 DNAH6Q9C0G6 4158 aa10.43□□□□□ -0.74
VARS-227ENST00000489979 EFCAB10A6NFE3 127 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 TRDCB7Z8K6 153 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 LGALS9O00182 355 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 NDUFB8O95169 186 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 BPNT1O95861 308 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 CBLN1P23435 193 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 TMEM50BP56557 158 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 ACSM3Q53FZ2 586 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 TTC23Q5W5X9 447 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 WFDC3Q8IUB2 231 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 FAM89BQ8N5H3 189 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 TTC9CQ8N5M4 171 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 ARHGAP5-AS1Q96IT6 56 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 CMSS1Q9BQ75 279 aaKnown RBP10.42□□□□□ -0.74
VARS-227ENST00000489979 URM1Q9BTM9 101 aaKnown RBP10.42□□□□□ -0.74
VARS-227ENST00000489979 SMPD3Q9NY59 655 aaPredicted RBP10.42□□□□□ -0.74
VARS-227ENST00000489979 MLXQ9UH92 298 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 HSF4Q9ULV5 492 aa10.42□□□□□ -0.74
VARS-227ENST00000489979 FOXI3A8MTJ6 420 aaPredicted RBP10.41□□□□□ -0.74
VARS-227ENST00000489979 MYL12BO14950 172 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 BET1O15155 118 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 SCAF4O95104 1147 aaKnown RBP10.41□□□□□ -0.74
VARS-227ENST00000489979 CRYZL1O95825 349 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 RRASP10301 218 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 SERPINB10P48595 397 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 WNT4P56705 351 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 TM4SF20Q53R12 229 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 FAM209BQ5JX69 171 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 C10orf55Q5SWW7 151 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 GPHB5Q86YW7 130 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 C10orf67Q8IYJ2 551 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 PHYHIPQ92561 330 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 PECRQ9BY49 303 aa10.41□□□□□ -0.74
VARS-227ENST00000489979 ZNF430Q9H8G1 570 aaPredicted RBP10.41□□□□□ -0.74
VARS-227ENST00000489979 TMEM213A2RRL7 107 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 FABP7O15540 132 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 SPRY2O43597 315 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 ACTL6BO94805 426 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 IGHV3-23P01764 117 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 BMI1P35226 326 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 P2RY14Q15391 338 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 ANKRD55Q3KP44 614 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 IGSF11Q5DX21 431 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 CEACAM19Q7Z692 300 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 UXS1Q8NBZ7 420 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 OR6M1Q8NGM8 313 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 OR4A4PQ8NGN8 299 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 SPIN2AQ99865 258 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 SPIN2BQ9BPZ2 258 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 TP53TG1Q9Y2A0 90 aa10.4□□□□□ -0.74
VARS-227ENST00000489979 ZNF320A2RRD8 509 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 SAA1P0DJI8 122 aaPredicted RBP10.39□□□□□ -0.75
VARS-227ENST00000489979 CD37P11049 281 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 DUTP33316 252 aaKnown RBP10.39□□□□□ -0.75
VARS-227ENST00000489979 ARL3P36405 182 aa10.39□□□□□ -0.75
VARS-227ENST00000489979 TPBGQ13641 420 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms