RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 EIF4EBP1Q13541 118 aaPredicted RBP11.47□□□□□ -0.57
CLDN11-209ENST00000489485 MSMO1Q15800 293 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 SP6Q3SY56 376 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 OR2B11Q5JQS5 317 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 FAM71F2Q6NXP2 309 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 KCTD9Q7L273 389 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 OR8H3Q8N146 312 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 SIGLECL1Q8N7X8 197 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 HSD17B10Q99714 261 aaKnown RBP11.47□□□□□ -0.57
CLDN11-209ENST00000489485 SEC22CQ9BRL7 303 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 C3orf85A0A1B0GTC6 90 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 C1QBP02746 253 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 CT45A6P0DMU7 189 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 CT45A5P0DMU8 189 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 CT45A7P0DMV0 189 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 F2RP25116 425 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 RRAS2P62070 204 aaPredicted RBP11.46□□□□□ -0.57
CLDN11-209ENST00000489485 DHRS2Q13268 280 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 ZNF66Q6ZN08 573 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 TCTEX1D2Q8WW35 142 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 TP53RKQ96S44 253 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 NABP2Q9BQ15 211 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 NAA60Q9H7X0 242 aa11.46□□□□□ -0.57
CLDN11-209ENST00000489485 OR5AC1P0C628 307 aa11.46□□□□□ -0.58
CLDN11-209ENST00000489485 CATR1Q13166 79 aa11.46□□□□□ -0.58
CLDN11-209ENST00000489485 SLC9A3R2Q15599 337 aa11.46□□□□□ -0.58
CLDN11-209ENST00000489485 LRRC75BQ2VPJ9 315 aa11.46□□□□□ -0.58
CLDN11-209ENST00000489485 Q6YL49 198 aa11.46□□□□□ -0.58
CLDN11-209ENST00000489485 ZNF383Q8NA42 475 aa11.46□□□□□ -0.58
CLDN11-209ENST00000489485 CASTOR1Q8WTX7 329 aa11.46□□□□□ -0.58
CLDN11-209ENST00000489485 FYTTD1Q96QD9 318 aaKnown RBP11.46□□□□□ -0.58
CLDN11-209ENST00000489485 TNFRSF19Q9NS68 423 aa11.46□□□□□ -0.58
CLDN11-209ENST00000489485 PRR13Q9NZ81 148 aa11.46□□□□□ -0.58
CLDN11-209ENST00000489485 KCNIP3Q9Y2W7 256 aa11.46□□□□□ -0.58
CLDN11-209ENST00000489485 JMJD1CQ15652 2540 aa11.45□□□□□ -0.58
CLDN11-209ENST00000489485 A0A0A6YYJ9 748 aa11.45□□□□□ -0.58
CLDN11-209ENST00000489485 C9orf170A2RU37 121 aa11.45□□□□□ -0.58
CLDN11-209ENST00000489485 RNF212BA8MTL3 300 aa11.45□□□□□ -0.58
CLDN11-209ENST00000489485 H3BUX3 64 aa11.45□□□□□ -0.58
CLDN11-209ENST00000489485 H7C2Y5 167 aa11.45□□□□□ -0.58
CLDN11-209ENST00000489485 HOXA3O43365 443 aaPredicted RBP11.45□□□□□ -0.58
CLDN11-209ENST00000489485 UBE2MP61081 183 aaKnown RBP11.45□□□□□ -0.58
CLDN11-209ENST00000489485 ZNF418Q8TF45 676 aaPredicted RBP11.45□□□□□ -0.58
CLDN11-209ENST00000489485 CFHR4Q92496 578 aa11.45□□□□□ -0.58
CLDN11-209ENST00000489485 PRAF2O60831 178 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 RAMP3O60896 148 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 FCGR3BO75015 233 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 IFNA2P01563 188 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 IGHV4-59P01825 116 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 IER3P46695 156 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 THBS3P49746 956 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 BRWD1-AS2P59051 145 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 HES1Q14469 280 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 THOC7Q6I9Y2 204 aaKnown RBP11.44□□□□□ -0.58
CLDN11-209ENST00000489485 LYG2Q86SG7 212 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 SPAG16Q8N0X2 631 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 GLYATL2Q8WU03 294 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 GALNT14Q96FL9 552 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 DUX5Q96PT3 197 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 PRDM13Q9H4Q3 707 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 LIN7CQ9NUP9 197 aaKnown RBP11.44□□□□□ -0.58
CLDN11-209ENST00000489485 BTBD17A6NE02 478 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 SFT2D2O95562 160 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 IGKV1D-33P01593 117 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 IGKV1-33P01594 117 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 IL5P05113 134 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 ANXA3P12429 323 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 LY6EQ16553 131 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 C11orf88Q6PI97 169 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 SSMEM1Q8WWF3 244 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 DDB2Q92466 427 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 ADTRPQ96IZ2 230 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 HYLS1Q96M11 299 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 GPN1Q9HCN4 374 aaPredicted RBP11.44□□□□□ -0.58
CLDN11-209ENST00000489485 PRELID3BQ9Y3B1 194 aa11.44□□□□□ -0.58
CLDN11-209ENST00000489485 H0Y980 276 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 H0YJW9 148 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 CREBL2O60519 120 aaPredicted RBP11.43□□□□□ -0.58
CLDN11-209ENST00000489485 APOA2P02652 100 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 SNRNP70P08621 437 aaKnown RBP11.43□□□□□ -0.58
CLDN11-209ENST00000489485 FAM106CPP0CH98 169 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 CD1BP29016 333 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 MC5RP33032 325 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 DYNLT3P51808 116 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 HABP2Q14520 560 aaPredicted RBP11.43□□□□□ -0.58
CLDN11-209ENST00000489485 HNF4GQ14541 408 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 AANATQ16613 207 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 LIN54Q6MZP7 749 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 UXS1Q8NBZ7 420 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 OR5AN1Q8NGI8 311 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 PIFOQ8TCI5 191 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 ZNF431Q8TF32 576 aaPredicted RBP11.43□□□□□ -0.58
CLDN11-209ENST00000489485 TMEM222Q9H0R3 208 aa11.43□□□□□ -0.58
CLDN11-209ENST00000489485 ANKRD34BA5PLL1 514 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 VENTXO95231 258 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 DUS4LO95620 317 aaKnown RBP11.42□□□□□ -0.58
CLDN11-209ENST00000489485 IGKV1-16P04430 117 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 SERPINE2P07093 398 aa11.42□□□□□ -0.58
CLDN11-209ENST00000489485 TMEM187Q14656 261 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms