RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 NXNL2Q5VZ03 156 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 PLET1Q6UQ28 207 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 ZNF383Q8NA42 475 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 OR51A2Q8NGJ7 313 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 CMTM3Q96MX0 182 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 DAZ1Q9NQZ3 744 aaKnown RBP8.23□□□□□ -1.09
HDAC6-233ENST00000489352 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 TBC1D24Q9ULP9 559 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 ZNF257Q9Y2Q1 563 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 IGKV3-7A0A075B6H7 116 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 TRBV7-1A0A0A6YYK4 115 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 ZNF705EA8MWA4 302 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-233ENST00000489352 PRKYO43930 277 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 IGLV2-23P01705 113 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 CRYGBP07316 175 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 HTN3P15516 51 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 RPA2P15927 270 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 MNAT1P51948 309 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 GPR176Q14439 515 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 GID4Q8IVV7 300 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 GAPTQ8N292 157 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 EDARADDQ8WWZ3 215 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 TMEM14BQ9NUH8 114 aa8.22□□□□□ -1.09
HDAC6-233ENST00000489352 SMPD3Q9NY59 655 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-233ENST00000489352 DYNC1I1O14576 645 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 GNGT2O14610 69 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 EREGO14944 169 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 CREBL2O60519 120 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-233ENST00000489352 RPSAP08865 295 aaKnown RBP8.21□□□□□ -1.1
HDAC6-233ENST00000489352 SPART-AS1P0CW21 52 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 PSMB6P28072 239 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 PAFAH1B2P68402 229 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 GK3PQ14409 553 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 PRSS8Q16651 343 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 MORN3Q6PF18 240 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-233ENST00000489352 PARP16Q8N5Y8 322 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 CXorf58Q96LI9 332 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 C20orf24Q9BUV8 137 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 GMPPBQ9Y5P6 360 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 X6R8D5 127 aa8.21□□□□□ -1.1
HDAC6-233ENST00000489352 DEFA4P12838 97 aa8.2□□□□□ -1.1
HDAC6-233ENST00000489352 HSD17B1P14061 328 aa8.2□□□□□ -1.1
HDAC6-233ENST00000489352 BTF3P20290 206 aaKnown RBP8.2□□□□□ -1.1
HDAC6-233ENST00000489352 GPR183P32249 361 aa8.2□□□□□ -1.1
HDAC6-233ENST00000489352 CCR9P51686 369 aa8.2□□□□□ -1.1
HDAC6-233ENST00000489352 NANOS3P60323 173 aaKnown RBP8.2□□□□□ -1.1
HDAC6-233ENST00000489352 DLK1P80370 383 aa8.2□□□□□ -1.1
HDAC6-233ENST00000489352 ICAM4Q14773 271 aa8.2□□□□□ -1.1
HDAC6-233ENST00000489352 CYP2R1Q6VVX0 501 aa8.2□□□□□ -1.1
HDAC6-233ENST00000489352 ZNF66Q6ZN08 573 aa8.2□□□□□ -1.1
HDAC6-233ENST00000489352 TEX45Q8NA69 505 aa8.2□□□□□ -1.1
HDAC6-233ENST00000489352 FGFR1OP2Q9NVK5 253 aa8.2□□□□□ -1.1
HDAC6-233ENST00000489352 WARS2Q9UGM6 360 aaKnown RBP8.2□□□□□ -1.1
HDAC6-233ENST00000489352 V9GYY5 206 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-233ENST00000489352 M0R1X1 148 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 CCDC22O60826 627 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 SC5DO75845 299 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 BAG2O95816 211 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 FAM107AO95990 144 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 HIST1H1BP16401 226 aaKnown RBP8.19□□□□□ -1.1
HDAC6-233ENST00000489352 FUT3P21217 361 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 ZNF93P35789 620 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-233ENST00000489352 CEACAM6P40199 344 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 RPS27AP62979 156 aaKnown RBP8.19□□□□□ -1.1
HDAC6-233ENST00000489352 RTL8BQ17RB0 113 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 LEMD1Q68G75 181 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 IDO2Q6ZQW0 420 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 GBGT1Q8N5D6 347 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 MRPL30Q8TCC3 161 aaKnown RBP8.19□□□□□ -1.1
HDAC6-233ENST00000489352 OR2A7Q96R45 310 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 AGMATQ9BSE5 352 aa8.19□□□□□ -1.1
HDAC6-233ENST00000489352 A0A1W2PP11 408 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 ITGB1BP1O14713 200 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 CST1P01037 141 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 GLAP06280 429 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 SPP1P10451 314 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 ZBTB25P24278 435 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 EMP1P54849 157 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 SNRPGP62308 76 aaKnown RBP8.18□□□□□ -1.1
HDAC6-233ENST00000489352 PLA2G7Q13093 441 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 AADACL4Q5VUY2 407 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 FDX2Q6P4F2 183 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 SSX9Q7RTT3 188 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 ZNRF2Q8NHG8 242 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 SETD6Q8TBK2 473 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 TMEM190Q8WZ59 177 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 CMTM5Q96DZ9 223 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 ZNF436Q9C0F3 470 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-233ENST00000489352 C11orf54Q9H0W9 315 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-233ENST00000489352 MAGIXQ9H6Y5 334 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 ARGLU1Q9NWB6 273 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-233ENST00000489352 CLEC5AQ9NY25 188 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 AASSQ9UDR5 926 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 ETV7Q9Y603 341 aa8.18□□□□□ -1.1
HDAC6-233ENST00000489352 HMX3A6NHT5 357 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 SRRM4A7MD48 611 aaKnown RBP8.17□□□□□ -1.1
HDAC6-233ENST00000489352 M0R129 80 aa8.17□□□□□ -1.1
HDAC6-233ENST00000489352 DNASE2O00115 360 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-233ENST00000489352 ZNF207O43670 478 aaKnown RBP8.17□□□□□ -1.1
HDAC6-233ENST00000489352 ANXA8P13928 327 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms