RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 ACACAQ13085 2346 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 PIGBOS1A0A0B4J2F0 54 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 IGHV1-18A0A0C4DH31 117 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 OOEPA6NGQ2 149 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 LRRC30A6NM36 301 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 COX5AP20674 150 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 HOXC12P31275 282 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 EIF2S3P41091 472 aaKnown RBP10.56□□□□□ -0.72
CLIC4-202ENST00000488683 ZNF134P52741 427 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 PYY3Q5JQD4 70 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 SLC35E4Q6ICL7 350 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 SLC35E3Q7Z769 313 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 DTD1Q8TEA8 209 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 SNRNP40Q96DI7 357 aaKnown RBP10.56□□□□□ -0.72
CLIC4-202ENST00000488683 SNX22Q96L94 193 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 GGACTQ9BVM4 153 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 PATZ1Q9HBE1 687 aaKnown RBP10.56□□□□□ -0.72
CLIC4-202ENST00000488683 PTPRZ1P23471 2315 aaPredicted RBP10.55□□□□□ -0.72
CLIC4-202ENST00000488683 PMS2P5A8MQ11 134 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 SLC31A2O15432 143 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 OPN1MWP04001 364 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 SMIM6P0DI80 62 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 OPN1MW2P0DN77 364 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 OPN1MW3P0DN78 364 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 TMEM41BQ5BJD5 291 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 FFAR4Q5NUL3 377 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 DEFB108BQ8NET1 73 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 OR10D4PQ8NGN7 298 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 OR4F5Q8NH21 305 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 Q8TCH9 128 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 OR4F4Q96R69 305 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 CEP295Q9C0D2 2601 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 RNF212BA8MTL3 300 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 S100A8P05109 93 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 SERF2P84101 59 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 H2BFWTQ7Z2G1 175 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 OR10G4Q8NGN3 311 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 OR10G9Q8NGN4 311 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 OR10G7Q8NGN6 311 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 FAM122AQ96E09 287 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 WFIKKN1Q96NZ8 548 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 SMIM7Q9BQ49 75 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 CXXC4Q9H2H0 198 aa10.55□□□□□ -0.72
CLIC4-202ENST00000488683 FAM90A26D6RGX4 464 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 SPRY3O43610 288 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 PAGE4O60829 102 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 FAM209BQ5JX69 171 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 MEGF10Q96KG7 1140 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 FAM210BQ96KR6 192 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 DERL1Q9BUN8 251 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 PARD6AQ9NPB6 346 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 DCAF16Q9NXF7 216 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 IGKV1D-17A0A075B6S4 117 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 MARCH11A6NNE9 402 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 K7EM74 188 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 LY86O95711 162 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 GZMHP20718 246 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 C16orf82Q7Z2V1 217 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 SDF2L1Q9HCN8 221 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 GNG12Q9UBI6 72 aa10.54□□□□□ -0.72
CLIC4-202ENST00000488683 ZGRF1Q86YA3 2104 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 IGHV2OR16-5A0A0B4J2B6 119 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 M0R1B8 84 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 FABP4P15090 132 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 SEM1Q6ZVN7 128 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 ZCCHC24Q8N2G6 241 aaKnown RBP10.53□□□□□ -0.72
CLIC4-202ENST00000488683 AGMATQ9BSE5 352 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 DKK4Q9UBT3 224 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 GAB2Q9UQC2 676 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.53□□□□□ -0.72
CLIC4-202ENST00000488683 GCH1P30793 250 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 MOGAT3Q86VF5 341 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 ABHD12Q8N2K0 398 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 ZBTB34Q8NCN2 500 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 RAB24Q969Q5 203 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 ZNF251Q9BRH9 671 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 PARD6GQ9BYG4 376 aaPredicted RBP10.53□□□□□ -0.72
CLIC4-202ENST00000488683 TOLLIPQ9H0E2 274 aa10.53□□□□□ -0.72
CLIC4-202ENST00000488683 PLXNB1O43157 2135 aa10.52□□□□□ -0.72
CLIC4-202ENST00000488683 RRHO14718 337 aa10.52□□□□□ -0.72
CLIC4-202ENST00000488683 TNFSF13O75888 250 aa10.52□□□□□ -0.72
CLIC4-202ENST00000488683 KITLGP21583 273 aa10.52□□□□□ -0.72
CLIC4-202ENST00000488683 NPPCP23582 126 aa10.52□□□□□ -0.72
CLIC4-202ENST00000488683 PRDX2P32119 198 aa10.52□□□□□ -0.72
CLIC4-202ENST00000488683 PRR7Q8TB68 274 aa10.52□□□□□ -0.72
CLIC4-202ENST00000488683 NPCDR1Q9BY65 106 aa10.52□□□□□ -0.72
CLIC4-202ENST00000488683 SIRT7Q9NRC8 400 aa10.52□□□□□ -0.72
CLIC4-202ENST00000488683 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.52□□□□□ -0.72
CLIC4-202ENST00000488683 C15orf65H3BRN8 121 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 M0R1X1 148 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 AQP7O14520 342 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 FTH1P19P0C7X4 201 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 HOXA5P20719 270 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 S100A12P80511 92 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 CATR1Q13166 79 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 ACSF3Q4G176 576 aaPredicted RBP10.52□□□□□ -0.73
CLIC4-202ENST00000488683 MRGPRGQ86SM5 289 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 ZNF383Q8NA42 475 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 OR10P1Q8NGE3 313 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms