RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 MPPED1O15442 326 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 RBMXL2O75526 392 aaKnown RBP14.38□□□□□ -0.11
GGPS1-206ENST00000488594 TUSC2O75896 110 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 CD7P09564 240 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 UCHL1P09936 223 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 APELAP0DMC3 54 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 TMEM50BP56557 158 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 UBE2KP61086 200 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 ATP5G2Q06055 141 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 TPBGQ13641 420 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 EXOSC2Q13868 293 aaKnown RBP14.38□□□□□ -0.11
GGPS1-206ENST00000488594 PRSS8Q16651 343 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 LAIR2Q6ISS4 152 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 KCTD12Q96CX2 325 aaKnown RBP14.38□□□□□ -0.11
GGPS1-206ENST00000488594 ARHGAP5-AS1Q96IT6 56 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 MND1Q9BWT6 205 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 SRD5A3Q9H8P0 318 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 PLGRKTQ9HBL7 147 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 AKIP1Q9NQ31 210 aa14.38□□□□□ -0.11
GGPS1-206ENST00000488594 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.37□□□□□ -0.11
GGPS1-206ENST00000488594 TRBV9A0A0B4J1U6 114 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 SLC17A2O00624 439 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 FABP7O15540 132 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 CREBL2O60519 120 aaPredicted RBP14.37□□□□□ -0.11
GGPS1-206ENST00000488594 DIRAS3O95661 229 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 RANBP1P43487 201 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 MRPS15P82914 257 aaKnown RBP14.37□□□□□ -0.11
GGPS1-206ENST00000488594 P2RY14Q15391 338 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 TNXAQ16473 311 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 MRGPRG-AS1Q2M3A8 158 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 DEFB114Q30KQ6 69 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 BPIFB6Q8NFQ5 453 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 OR56B1Q8NGI3 324 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 OR10J5Q8NHC4 309 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 SRSF12Q8WXF0 261 aaKnown RBP14.37□□□□□ -0.11
GGPS1-206ENST00000488594 ADTRPQ96IZ2 230 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 PECRQ9BY49 303 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 ZC4H2Q9NQZ6 224 aa14.37□□□□□ -0.11
GGPS1-206ENST00000488594 TECRQ9NZ01 308 aaKnown RBP14.37□□□□□ -0.11
GGPS1-206ENST00000488594 KIR2DS2P43631 304 aa14.36□□□□□ -0.11
GGPS1-206ENST00000488594 NECAP1Q8NC96 275 aa14.36□□□□□ -0.11
GGPS1-206ENST00000488594 FBLIM1Q8WUP2 373 aa14.36□□□□□ -0.11
GGPS1-206ENST00000488594 SPIN2AQ99865 258 aa14.36□□□□□ -0.11
GGPS1-206ENST00000488594 SPIN2BQ9BPZ2 258 aa14.36□□□□□ -0.11
GGPS1-206ENST00000488594 CABLES2Q9BTV7 478 aa14.36□□□□□ -0.11
GGPS1-206ENST00000488594 FKBP14Q9NWM8 211 aa14.36□□□□□ -0.11
GGPS1-206ENST00000488594 ERICH4A6NGS2 130 aa14.35□□□□□ -0.11
GGPS1-206ENST00000488594 BET1O15155 118 aa14.35□□□□□ -0.11
GGPS1-206ENST00000488594 ACTL6BO94805 426 aa14.35□□□□□ -0.11
GGPS1-206ENST00000488594 SPHARQ15513 63 aa14.35□□□□□ -0.11
GGPS1-206ENST00000488594 RAB11BQ15907 218 aa14.35□□□□□ -0.11
GGPS1-206ENST00000488594 GUCA2BQ16661 112 aa14.35□□□□□ -0.11
GGPS1-206ENST00000488594 SLC16A13Q7RTY0 426 aa14.35□□□□□ -0.11
GGPS1-206ENST00000488594 OSR1Q8TAX0 266 aaPredicted RBP14.35□□□□□ -0.11
GGPS1-206ENST00000488594 ACOT12Q8WYK0 555 aa14.35□□□□□ -0.11
GGPS1-206ENST00000488594 LINC00476Q8WZB0 136 aa14.35□□□□□ -0.11
GGPS1-206ENST00000488594 TRBV6-7A0A0A0MS04 114 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 C2orf70A6NJV1 201 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 GNAO1P09471 354 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 FOLR2P14207 255 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 ZNF45Q02386 682 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 PLAC9Q5JTB6 97 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 WFDC10AQ9H1F0 79 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 RBM7Q9Y580 266 aaKnown RBP14.34□□□□□ -0.11
GGPS1-206ENST00000488594 LGALS9O00182 355 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 CRYZL1O95825 349 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 PRH1P02810 166 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 CDK1P06493 297 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 CD3GP09693 182 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 IGSF11Q5DX21 431 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 IDO2Q6ZQW0 420 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 SLC25A42Q86VD7 318 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 TTC9CQ8N5M4 171 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 DDB2Q92466 427 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 CENPOQ9BU64 300 aa14.34□□□□□ -0.11
GGPS1-206ENST00000488594 GGCTO75223 188 aaKnown RBP14.33□□□□□ -0.12
GGPS1-206ENST00000488594 ARL6IP5O75915 188 aa14.33□□□□□ -0.12
GGPS1-206ENST00000488594 FCGR3AP08637 254 aa14.33□□□□□ -0.12
GGPS1-206ENST00000488594 MAP2K4P45985 399 aa14.33□□□□□ -0.12
GGPS1-206ENST00000488594 C15orf32Q32M92 178 aa14.33□□□□□ -0.12
GGPS1-206ENST00000488594 UFD1Q92890 307 aa14.33□□□□□ -0.12
GGPS1-206ENST00000488594 WDR89Q96FK6 387 aaPredicted RBP14.33□□□□□ -0.12
GGPS1-206ENST00000488594 C5orf30Q96GV9 206 aa14.33□□□□□ -0.12
GGPS1-206ENST00000488594 GFI1Q99684 422 aa14.33□□□□□ -0.12
GGPS1-206ENST00000488594 ZNF430Q9H8G1 570 aaPredicted RBP14.33□□□□□ -0.12
GGPS1-206ENST00000488594 GSTT2P0CG29 244 aa14.32□□□□□ -0.12
GGPS1-206ENST00000488594 GSTT2BP0CG30 244 aa14.32□□□□□ -0.12
GGPS1-206ENST00000488594 DUTP33316 252 aaKnown RBP14.32□□□□□ -0.12
GGPS1-206ENST00000488594 CDK10Q15131 360 aa14.32□□□□□ -0.12
GGPS1-206ENST00000488594 MMD2Q8IY49 270 aa14.32□□□□□ -0.12
GGPS1-206ENST00000488594 FAM3DQ96BQ1 224 aa14.32□□□□□ -0.12
GGPS1-206ENST00000488594 RAB3CQ96E17 227 aa14.32□□□□□ -0.12
GGPS1-206ENST00000488594 GINS4Q9BRT9 223 aa14.32□□□□□ -0.12
GGPS1-206ENST00000488594 LSM2Q9Y333 95 aaKnown RBP14.32□□□□□ -0.12
GGPS1-206ENST00000488594 AK6Q9Y3D8 172 aaKnown RBP14.32□□□□□ -0.12
GGPS1-206ENST00000488594 DENRO43583 198 aaKnown RBP14.31□□□□□ -0.12
GGPS1-206ENST00000488594 MED22Q15528 200 aa14.31□□□□□ -0.12
GGPS1-206ENST00000488594 TRAM1Q15629 374 aa14.31□□□□□ -0.12
GGPS1-206ENST00000488594 C2orf76Q3KRA6 126 aa14.31□□□□□ -0.12
GGPS1-206ENST00000488594 GPHB5Q86YW7 130 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms