RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 LEAP2Q969E1 77 aa10.42□□□□□ -0.74
NELFE-209ENST00000488426 POMT1Q9Y6A1 747 aa10.42□□□□□ -0.74
NELFE-209ENST00000488426 YLPM1P49750 1951 aaKnown RBP10.42□□□□□ -0.74
NELFE-209ENST00000488426 K7EPK0 472 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 M0R1X1 148 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 PROP1O75360 226 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 SCO1O75880 301 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 SCGB1D2O95969 90 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 RBP4P02753 201 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 KIR2DS2P43631 304 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 AKR1C2P52895 323 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 WDR25Q64LD2 544 aaPredicted RBP10.41□□□□□ -0.74
NELFE-209ENST00000488426 FAM219AQ8IW50 185 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 FAM71E2Q8N5Q1 922 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 RNASE11Q8TAA1 199 aaKnown RBP10.41□□□□□ -0.74
NELFE-209ENST00000488426 RRNAD1Q96FB5 475 aaKnown RBP10.41□□□□□ -0.74
NELFE-209ENST00000488426 ADTRPQ96IZ2 230 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 AQP10Q96PS8 301 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 PATZ1Q9HBE1 687 aaKnown RBP10.41□□□□□ -0.74
NELFE-209ENST00000488426 CR1P17927 2039 aa10.41□□□□□ -0.74
NELFE-209ENST00000488426 A0A087X0M5 115 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 A0A1B0GX30 115 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 LINC00473A8K010 186 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 C17orf98A8MV24 154 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 E5RGE8 158 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 RNF223E7ERA6 249 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 F5H0A9 414 aaPredicted RBP10.4□□□□□ -0.74
NELFE-209ENST00000488426 RBFOX2O43251 390 aaKnown RBP eCLIP10.4□□□□□ -0.74
NELFE-209ENST00000488426 IGHV3-7P01780 117 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 NKX2-1P43699 371 aaPredicted RBP10.4□□□□□ -0.74
NELFE-209ENST00000488426 GPR6P46095 362 aaPredicted RBP10.4□□□□□ -0.74
NELFE-209ENST00000488426 GNG10P50151 68 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 POLR2GP62487 172 aaKnown RBP eCLIP10.4□□□□□ -0.74
NELFE-209ENST00000488426 KRTAP1-1Q07627 177 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 CLEC12BQ2HXU8 276 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 UTF1Q5T230 341 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 TEX261Q6UWH6 196 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 ODF3L1Q8IXM7 274 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 LILRB2Q8N423 598 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 ZNF596Q8TC21 504 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 GPR146Q96CH1 333 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 NSG2Q9Y328 171 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 PRELID3BQ9Y3B1 194 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 LSM5Q9Y4Y9 91 aaKnown RBP10.4□□□□□ -0.74
NELFE-209ENST00000488426 U3KQ87 197 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 DOCK11Q5JSL3 2073 aa10.4□□□□□ -0.74
NELFE-209ENST00000488426 SAA2-SAA4A0A096LPE2 208 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 KANTRA0A1W2PQU2 76 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 BCL2L11O43521 198 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 RAMP3O60896 148 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 PITX3O75364 302 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 IGKV1-5P01602 117 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 SAA2P0DJI9 122 aaPredicted RBP10.4□□□□□ -0.75
NELFE-209ENST00000488426 THBS3P49746 956 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 BRWD1-AS2P59051 145 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 RPL39P5Q59GN2 51 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 FOXRED2Q8IWF2 684 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 LYG1Q8N1E2 194 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 LINC00311Q8N616 119 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 OR8H1Q8NGG4 311 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 S1PR3Q99500 378 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 ZNF251Q9BRH9 671 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 PLEKHA2Q9HB19 425 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 MMP24Q9Y5R2 645 aa10.4□□□□□ -0.75
NELFE-209ENST00000488426 A0A0G2JRQ6 117 aa10.39□□□□□ -0.75
NELFE-209ENST00000488426 A0A1W2PPE3 182 aa10.39□□□□□ -0.75
NELFE-209ENST00000488426 IGHV1-8P0DP01 117 aa10.39□□□□□ -0.75
NELFE-209ENST00000488426 ZNF816Q0VGE8 651 aaPredicted RBP10.39□□□□□ -0.75
NELFE-209ENST00000488426 OR2B11Q5JQS5 317 aa10.39□□□□□ -0.75
NELFE-209ENST00000488426 NCR3LG1Q68D85 454 aa10.39□□□□□ -0.75
NELFE-209ENST00000488426 ZNF600Q6ZNG1 722 aa10.39□□□□□ -0.75
NELFE-209ENST00000488426 LY6G5BQ8NDX9 201 aa10.39□□□□□ -0.75
NELFE-209ENST00000488426 COA4Q9NYJ1 87 aa10.39□□□□□ -0.75
NELFE-209ENST00000488426 SESN1Q9Y6P5 492 aa10.39□□□□□ -0.75
NELFE-209ENST00000488426 DNHD1Q96M86 4753 aa10.39□□□□□ -0.75
NELFE-209ENST00000488426 S1PR2O95136 353 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 IFNA7P01567 189 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 P0C879 139 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 MMP9P14780 707 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 PVALBP20472 110 aaPredicted RBP10.38□□□□□ -0.75
NELFE-209ENST00000488426 EPHA1P21709 976 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 GNB2P62879 340 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 ID3Q02535 119 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 FAM71F2Q6NXP2 309 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 ZNF680Q8NEM1 530 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 DDB2Q92466 427 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 RCL1Q9Y2P8 373 aaKnown RBP10.38□□□□□ -0.75
NELFE-209ENST00000488426 IGHV4-30-2A0A087WSY4 118 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 PPIAL4CA0A0B4J2A2 164 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 hCG_1809904A0A1W2PP81 198 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 A0A1W2PPE2 198 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 A0A1W2PR64 198 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 A0A1W2PRV1 198 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 HPRT1P00492 218 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 LIPFP07098 398 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 PPIAL4GP0DN37 164 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 P2RY1P47900 373 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 ZNF833PQ6ZTB9 187 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 C11orf42Q8N5U0 333 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 OR9G1Q8NH87 305 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms