RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 ARID1AO14497 2285 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 IGHV2-26A0A0B4J1V2 119 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 A0A0G2JRQ6 117 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 A1L4Q6 167 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 MARCH11A6NNE9 402 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 C22orf46C9J442 243 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 TXNL1O43396 289 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 GPR137BO60478 399 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 FOXH1O75593 365 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 S1PR2O95136 353 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 LY86O95711 162 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 HRASP01112 189 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 KRASP01116 189 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 CT45A6P0DMU7 189 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 CT45A5P0DMU8 189 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 CT45A7P0DMV0 189 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 PLA2G2AP14555 144 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 NQO2P16083 231 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 EPHA1P21709 976 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 RPL12P30050 165 aaKnown RBP5.03□□□□□ -1.6
VAMP3-203ENST00000487194 G6PCP35575 357 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 RAB13P51153 203 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 AP2S1P53680 142 aaPredicted RBP5.03□□□□□ -1.6
VAMP3-203ENST00000487194 ATP5J2P56134 94 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 BRWD1-AS2P59051 145 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 UBA52P62987 128 aaKnown RBP5.03□□□□□ -1.6
VAMP3-203ENST00000487194 EIF5AP63241 154 aaKnown RBP5.03□□□□□ -1.6
VAMP3-203ENST00000487194 HLA-DRB5Q30154 266 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 UTF1Q5T230 341 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 TEX261Q6UWH6 196 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 ZNF383Q8NA42 475 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 DMBX1Q8NFW5 382 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 OR8H1Q8NGG4 311 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 R3HDM4Q96D70 268 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 RAB40CQ96S21 281 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 GSX2Q9BZM3 304 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 BPESC1Q9GZL8 116 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 SLC25A31Q9H0C2 315 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 NARFLQ9H6Q4 476 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 HEXA-AS1Q9H8Q6 139 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.03□□□□□ -1.6
VAMP3-203ENST00000487194 SLC35D1Q9NTN3 355 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 CACNG5Q9UF02 275 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 RCL1Q9Y2P8 373 aaKnown RBP5.03□□□□□ -1.6
VAMP3-203ENST00000487194 KPTNQ9Y664 436 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 U3KQ87 197 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 COL12A1Q99715 3063 aa5.03□□□□□ -1.6
VAMP3-203ENST00000487194 SYNGR2O43760 224 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 CHST1O43916 411 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 RBMXL2O75526 392 aaKnown RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 CRYZL1O95825 349 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 IGLV1-47P01700 117 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 GAPDHP04406 335 aaKnown RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 P0C879 139 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 HKR1P10072 659 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 PRTN3P24158 256 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 MC5RP33032 325 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 CEACAM3P40198 252 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 TAS2R30P59541 319 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 LMO4P61968 165 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 ARF6P62330 175 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 POLR2GP62487 172 aaKnown RBP eCLIP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 RPL23AP62750 156 aaKnown RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 BAXQ07812 192 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 POU2AF1Q16633 256 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 NDUFA5Q16718 116 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 MIDNQ504T8 468 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 CXorf66Q5JRM2 361 aaPredicted RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 Q6ZRM9 215 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 C1orf229Q6ZS94 237 aaPredicted RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 PDPNQ86YL7 162 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 TGIF2LXQ8IUE1 241 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 ZNF295-AS1Q8N0V1 137 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 OR2C3Q8N628 320 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 ZNF680Q8NEM1 530 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 OR11H6Q8NGC7 330 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 OR5AN1Q8NGI8 311 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 OR4A16Q8NH70 328 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 CLDND2Q8NHS1 167 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 OSR1Q8TAX0 266 aaPredicted RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 C10orf105Q8TEF2 133 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 ST6GALNAC6Q969X2 333 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 MARVELD3Q96A59 401 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 CIB3Q96Q77 187 aaPredicted RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 ZNF471Q9BX82 626 aaPredicted RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 UNKLQ9H9P5 680 aaKnown RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 LYRM2Q9NU23 88 aaPredicted RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 HSPB7Q9UBY9 170 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 UBQLN2Q9UHD9 624 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 ITGB1BP2Q9UKP3 347 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 POLR3KQ9Y2Y1 108 aaPredicted RBP5.02□□□□□ -1.61
VAMP3-203ENST00000487194 WASHC3Q9Y3C0 194 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 WSB1Q9Y6I7 421 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 FBN2P35556 2912 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 LRBAP50851 2863 aa5.02□□□□□ -1.61
VAMP3-203ENST00000487194 SPG11Q96JI7 2443 aa5.01□□□□□ -1.61
VAMP3-203ENST00000487194 IGHV2-70DA0A0C4DH43 119 aa5.01□□□□□ -1.61
VAMP3-203ENST00000487194 MSGN1A6NI15 193 aa5.01□□□□□ -1.61
VAMP3-203ENST00000487194 KIAA1324LA8MWY0 1029 aaPredicted RBP5.01□□□□□ -1.61
VAMP3-203ENST00000487194 LEUTXA8MZ59 168 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms