RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 METTL21EPA6NDL7 271 aa18.84■□□□□ 0.61
LIME1-206ENST00000487026 J3QRK9 145 aa18.84■□□□□ 0.61
LIME1-206ENST00000487026 APELAP0DMC3 54 aa18.84■□□□□ 0.61
LIME1-206ENST00000487026 TMEM177Q53S58 311 aa18.84■□□□□ 0.61
LIME1-206ENST00000487026 CBX3Q13185 183 aa18.83■□□□□ 0.6
LIME1-206ENST00000487026 RTL8BQ17RB0 113 aa18.83■□□□□ 0.6
LIME1-206ENST00000487026 MRGPRG-AS1Q2M3A8 158 aa18.83■□□□□ 0.6
LIME1-206ENST00000487026 RANGRFQ9HD47 186 aaPredicted RBP18.83■□□□□ 0.6
LIME1-206ENST00000487026 H3BUA1 57 aa18.82■□□□□ 0.6
LIME1-206ENST00000487026 DIRAS3O95661 229 aa18.82■□□□□ 0.6
LIME1-206ENST00000487026 FRMD6-AS1P0C7T7 363 aa18.82■□□□□ 0.6
LIME1-206ENST00000487026 TAGLNQ01995 201 aaKnown RBP18.82■□□□□ 0.6
LIME1-206ENST00000487026 SRSF7Q16629 238 aaKnown RBP eCLIP18.82■□□□□ 0.6
LIME1-206ENST00000487026 CDNFQ49AH0 187 aa18.82■□□□□ 0.6
LIME1-206ENST00000487026 H1FOOQ8IZA3 346 aaPredicted RBP18.82■□□□□ 0.6
LIME1-206ENST00000487026 RSRP1Q9BUV0 290 aa18.82■□□□□ 0.6
LIME1-206ENST00000487026 ELOVL1Q9BW60 279 aa18.82■□□□□ 0.6
LIME1-206ENST00000487026 RAB26Q9ULW5 256 aa18.82■□□□□ 0.6
LIME1-206ENST00000487026 A0A0G2JLM5 398 aa18.81■□□□□ 0.6
LIME1-206ENST00000487026 LINC00473A8K010 186 aa18.81■□□□□ 0.6
LIME1-206ENST00000487026 DUTP33316 252 aaKnown RBP18.81■□□□□ 0.6
LIME1-206ENST00000487026 IDO2Q6ZQW0 420 aa18.81■□□□□ 0.6
LIME1-206ENST00000487026 DDB2Q92466 427 aa18.81■□□□□ 0.6
LIME1-206ENST00000487026 ST6GALNAC5Q9BVH7 336 aa18.81■□□□□ 0.6
LIME1-206ENST00000487026 COA4Q9NYJ1 87 aa18.81■□□□□ 0.6
LIME1-206ENST00000487026 DNAH7Q8WXX0 4024 aa18.8■□□□□ 0.6
LIME1-206ENST00000487026 MSGN1A6NI15 193 aa18.8■□□□□ 0.6
LIME1-206ENST00000487026 CRYZL1O95825 349 aa18.8■□□□□ 0.6
LIME1-206ENST00000487026 RRASP10301 218 aa18.8■□□□□ 0.6
LIME1-206ENST00000487026 Q6ZS49 121 aa18.8■□□□□ 0.6
LIME1-206ENST00000487026 TMEM68Q96MH6 324 aa18.8■□□□□ 0.6
LIME1-206ENST00000487026 PHB2Q99623 299 aa18.8■□□□□ 0.6
LIME1-206ENST00000487026 TINAGL1Q9GZM7 467 aaPredicted RBP18.8■□□□□ 0.6
LIME1-206ENST00000487026 STUB1Q9UNE7 303 aa18.8■□□□□ 0.6
LIME1-206ENST00000487026 RBMXL2O75526 392 aaKnown RBP18.79■□□□□ 0.6
LIME1-206ENST00000487026 ZP3P21754 424 aa18.79■□□□□ 0.6
LIME1-206ENST00000487026 TNXAQ16473 311 aa18.79■□□□□ 0.6
LIME1-206ENST00000487026 ANKRD13BQ86YJ7 626 aa18.79■□□□□ 0.6
LIME1-206ENST00000487026 RCHY1Q96PM5 261 aa18.79■□□□□ 0.6
LIME1-206ENST00000487026 TXNL4BQ9NX01 149 aaKnown RBP18.79■□□□□ 0.6
LIME1-206ENST00000487026 ADAM30Q9UKF2 790 aa18.79■□□□□ 0.6
LIME1-206ENST00000487026 IGLV1-51P01701 117 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 TRBV12-3P01733 135 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 GALP22466 123 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 PSMB9P28065 219 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 GABARAPL2P60520 117 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 UBE2KP61086 200 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 KLF5Q13887 457 aaPredicted RBP18.78■□□□□ 0.6
LIME1-206ENST00000487026 PRSS8Q16651 343 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 VMA21Q3ZAQ7 101 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 UBE2UQ5VVX9 321 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 SPARTQ8N0X7 666 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 TEX45Q8NA69 505 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 ADTRPQ96IZ2 230 aa18.78■□□□□ 0.6
LIME1-206ENST00000487026 NFYAP23511 347 aaPredicted RBP18.77■□□□□ 0.6
LIME1-206ENST00000487026 DTYMKP23919 212 aa18.77■□□□□ 0.6
LIME1-206ENST00000487026 SYNJ2BPP57105 145 aa18.77■□□□□ 0.6
LIME1-206ENST00000487026 DYRK1AQ13627 763 aa18.77■□□□□ 0.6
LIME1-206ENST00000487026 PEF1Q9UBV8 284 aaKnown RBP18.77■□□□□ 0.6
LIME1-206ENST00000487026 NOTOA8MTQ0 251 aa18.76■□□□□ 0.59
LIME1-206ENST00000487026 HACD4Q5VWC8 232 aa18.76■□□□□ 0.59
LIME1-206ENST00000487026 ZNF343Q6P1L6 599 aa18.76■□□□□ 0.59
LIME1-206ENST00000487026 IL34Q6ZMJ4 242 aa18.76■□□□□ 0.59
LIME1-206ENST00000487026 Q8N1Y9 231 aa18.76■□□□□ 0.59
LIME1-206ENST00000487026 NUDCD2Q8WVJ2 157 aa18.76■□□□□ 0.59
LIME1-206ENST00000487026 ACOT12Q8WYK0 555 aa18.76■□□□□ 0.59
LIME1-206ENST00000487026 CENPOQ9BU64 300 aa18.76■□□□□ 0.59
LIME1-206ENST00000487026 DAPK2Q9UIK4 370 aa18.76■□□□□ 0.59
LIME1-206ENST00000487026 RRP15Q9Y3B9 282 aaKnown RBP18.76■□□□□ 0.59
LIME1-206ENST00000487026 TNCP24821 2201 aa18.76■□□□□ 0.59
LIME1-206ENST00000487026 C3orf84H3BNL1 204 aa18.75■□□□□ 0.59
LIME1-206ENST00000487026 MRPS14O60783 128 aaKnown RBP18.75■□□□□ 0.59
LIME1-206ENST00000487026 BRI3O95415 125 aa18.75■□□□□ 0.59
LIME1-206ENST00000487026 PRH1P02810 166 aa18.75■□□□□ 0.59
LIME1-206ENST00000487026 AADACP22760 399 aa18.75■□□□□ 0.59
LIME1-206ENST00000487026 FGF9P31371 208 aaPredicted RBP18.75■□□□□ 0.59
LIME1-206ENST00000487026 ARL6IP1Q15041 203 aa18.75■□□□□ 0.59
LIME1-206ENST00000487026 ADAD2Q8NCV1 583 aaKnown RBP18.75■□□□□ 0.59
LIME1-206ENST00000487026 OR9G4Q8NGQ1 327 aa18.75■□□□□ 0.59
LIME1-206ENST00000487026 SRSF12Q8WXF0 261 aaKnown RBP18.75■□□□□ 0.59
LIME1-206ENST00000487026 DCUN1D5Q9BTE7 237 aa18.75■□□□□ 0.59
LIME1-206ENST00000487026 ZNF430Q9H8G1 570 aaPredicted RBP18.75■□□□□ 0.59
LIME1-206ENST00000487026 TMEM235A6NFC5 223 aa18.74■□□□□ 0.59
LIME1-206ENST00000487026 MPPED1O15442 326 aa18.74■□□□□ 0.59
LIME1-206ENST00000487026 FCGR3BO75015 233 aa18.74■□□□□ 0.59
LIME1-206ENST00000487026 TUSC2O75896 110 aa18.74■□□□□ 0.59
LIME1-206ENST00000487026 RPL30P62888 115 aaKnown RBP18.74■□□□□ 0.59
LIME1-206ENST00000487026 OR2B11Q5JQS5 317 aa18.74■□□□□ 0.59
LIME1-206ENST00000487026 ZNF645Q8N7E2 425 aa18.74■□□□□ 0.59
LIME1-206ENST00000487026 OSR1Q8TAX0 266 aaPredicted RBP18.74■□□□□ 0.59
LIME1-206ENST00000487026 USMG5Q96IX5 58 aa18.74■□□□□ 0.59
LIME1-206ENST00000487026 OR2W1Q9Y3N9 320 aa18.74■□□□□ 0.59
LIME1-206ENST00000487026 IGKV1D-13A0A0B4J2D9 117 aa18.73■□□□□ 0.59
LIME1-206ENST00000487026 HLA-DQB1P01920 261 aa18.73■□□□□ 0.59
LIME1-206ENST00000487026 OR9G9P0C7N8 305 aa18.73■□□□□ 0.59
LIME1-206ENST00000487026 SAA1P0DJI8 122 aaPredicted RBP18.73■□□□□ 0.59
LIME1-206ENST00000487026 IGHV4-30-4P0DP06 118 aa18.73■□□□□ 0.59
LIME1-206ENST00000487026 IGKV1-13P0DP09 117 aa18.73■□□□□ 0.59
LIME1-206ENST00000487026 OR51E2Q9H255 320 aa18.73■□□□□ 0.59
LIME1-206ENST00000487026 SSX5O60225 188 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms