RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 LANCL1O43813 399 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF780AO75290 641 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 SAP30O75446 220 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 OR7C1O76099 320 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 HLA-DRB1P01911 266 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 MT-ND4P03905 459 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 CD2P06729 351 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 GP9P14770 177 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 SPNP16150 400 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 RBM11P57052 281 aaKnown RBP3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 GPR176Q14439 515 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 ZSCAN26Q16670 478 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 MPV17LQ2QL34 196 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 KIAA1644Q3SXP7 199 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 CT45A1Q5HYN5 189 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 FFAR4Q5NUL3 377 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 ATAD3CQ5T2N8 411 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 TRAT1Q6PIZ9 186 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 LHFPL3Q86UP9 236 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 GAPTQ8N292 157 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 STX19Q8N4C7 294 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 MINDY2Q8NBR6 621 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF439Q8NDP4 499 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 OR6Q1Q8NGQ2 317 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 OR10K1Q8NGX5 313 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 OR52N1Q8NH53 320 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 CT45A3Q8NHU0 189 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 CCDC107Q8WV48 283 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 TSEN15Q8WW01 171 aaKnown RBP3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 DLX4Q92988 240 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 CENPNQ96H22 339 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 PRAC1Q96KF2 57 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 C4orf36Q96KX1 117 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 S100A13Q99584 98 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 PDCD1LG2Q9BQ51 273 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 TM2D3Q9BRN9 247 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 GHITMQ9H3K2 345 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 ISG20L2Q9H9L3 353 aaKnown RBP3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 GNB4Q9HAV0 340 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 EDA2RQ9HAV5 297 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 SPACA1Q9HBV2 294 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 ISYNA1Q9NPH2 558 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 TMEM138Q9NPI0 162 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 PAK1IP1Q9NWT1 392 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 IMPAD1Q9NX62 359 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF581Q9P0T4 197 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 ING4Q9UNL4 249 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 ERGIC3Q9Y282 383 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 WSB1Q9Y6I7 421 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 BIRC6Q9NR09 4857 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 CSMD3Q7Z407 3707 aa3.01□□□□□ -1.93
SNRNP40-205ENST00000486941 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 IGHV7-81A0A0B4J1V7 117 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 IGHV3-43A0A0B4J1X8 118 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 TRIM64CA6NLI5 447 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 C12orf77C9JDV5 145 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 MCRIP1C9JLW8 97 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 E9PI62 339 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 LINC01619G3V211 115 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 AIPO00170 330 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 ATP6V0E1O15342 81 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 SLC31A2O15432 143 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 NBR2O15453 112 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 CA11O75493 328 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 CDRT1O95170 752 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 FADS2O95864 444 aaKnown RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 HBZP02008 142 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 HSPB1P04792 205 aaKnown RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 GLAP06280 429 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 LGALS1P09382 135 aaKnown RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 OR8U9P0C7N5 309 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 IGHV3-43DP0DP04 118 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 SLC2A2P11168 524 aaPredicted RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 GTF2F2P13984 249 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 GABRB1P18505 474 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 SERPINA2P20848 420 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF93P35789 620 aaPredicted RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 GBX2P52951 348 aaPredicted RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 ACTBP60709 375 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 TMEM267Q0VDI3 215 aaPredicted RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 RAB40BQ12829 278 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 MMDQ15546 238 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 C5orf64Q2M2E5 130 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 CCDC58Q4VC31 144 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 MORN2Q502X0 79 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 LY6G6FQ5SQ64 297 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 C6orf183Q5T699 404 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 SYT6Q5T7P8 510 aaPredicted RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 LPCAT4Q643R3 524 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF660Q6AZW8 331 aaPredicted RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 ZFAND6Q6FIF0 208 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 RPL22L1Q6P5R6 122 aaKnown RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF554Q86TJ5 538 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 LYPD6Q86Y78 171 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 TCTEX1D1Q8N7M0 179 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 NPBQ8NG41 125 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 OR51A2Q8NGJ7 313 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 UBALD1Q8TB05 177 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 GPR148Q8TDV2 347 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms