RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 DCUN1D4Q92564 292 aa6.9□□□□□ -1.3
APTX-228ENST00000486724 CMBLQ96DG6 245 aa6.9□□□□□ -1.3
APTX-228ENST00000486724 CPNE2Q96FN4 548 aaPredicted RBP6.9□□□□□ -1.3
APTX-228ENST00000486724 BSCL2Q96G97 398 aaPredicted RBP6.9□□□□□ -1.3
APTX-228ENST00000486724 SCGB3A2Q96PL1 93 aa6.9□□□□□ -1.3
APTX-228ENST00000486724 SSBP3Q9BWW4 388 aaPredicted RBP6.9□□□□□ -1.3
APTX-228ENST00000486724 SLC35B3Q9H1N7 401 aa6.9□□□□□ -1.3
APTX-228ENST00000486724 STEAP1Q9UHE8 339 aa6.9□□□□□ -1.3
APTX-228ENST00000486724 VPREB3Q9UKI3 123 aa6.9□□□□□ -1.3
APTX-228ENST00000486724 PIGLQ9Y2B2 252 aa6.9□□□□□ -1.3
APTX-228ENST00000486724 UMAD1C9J7I0 102 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 HSPA12AO43301 675 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 HLA-AP01891 365 aaKnown RBP6.89□□□□□ -1.31
APTX-228ENST00000486724 PMP2P02689 132 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 MAS1P04201 325 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 RPLP1P05386 114 aaKnown RBP6.89□□□□□ -1.31
APTX-228ENST00000486724 CD37P11049 281 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 RAC2P15153 192 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 ERVFC1-1P60608 527 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 GUK1Q16774 197 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 ZNF674Q2M3X9 581 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 KHDC3LQ587J8 217 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 GGNBP1Q5YKI7 109 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 ZFAND6Q6FIF0 208 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 NDUFA11Q86Y39 141 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 LYPD6Q86Y78 171 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 OR5AS1Q8N127 324 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 OR56B2PQ8NGI1 322 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 OR51A2Q8NGJ7 313 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 DDB2Q92466 427 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 DPF1Q92782 380 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 RCC1LQ96I51 464 aaKnown RBP6.89□□□□□ -1.31
APTX-228ENST00000486724 PACRGQ96M98 296 aaPredicted RBP6.89□□□□□ -1.31
APTX-228ENST00000486724 TECTBQ96PL2 329 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 OR51B6Q9H340 312 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 SPACA1Q9HBV2 294 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 RAB18Q9NP72 206 aa6.89□□□□□ -1.31
APTX-228ENST00000486724 IGKV1-9A0A0C4DH69 117 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 KIR2DS1A0A191URI9 304 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 A0A1W2PN81 502 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 CD300LBA8K4G0 201 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 RAB27BO00194 218 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 SLC17A2O00624 439 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 ANGPTL7O43827 346 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 SCGNO76038 276 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 CYB5AP00167 134 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 AMY2AP04746 511 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 SEC11BP0C7V7 166 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 HOXD3P31249 432 aaPredicted RBP6.88□□□□□ -1.31
APTX-228ENST00000486724 CHRNA7P36544 502 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 SNCAP37840 140 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 CD200P41217 278 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 FGF12P61328 243 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 ERVS71-1P61550 626 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 CNN3Q15417 329 aaKnown RBP6.88□□□□□ -1.31
APTX-228ENST00000486724 SCGB2B2Q4G0G5 96 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 C1orf100Q5SVJ3 147 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 SPATA46Q5T0L3 261 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 MBNL2Q5VZF2 373 aaKnown RBP6.88□□□□□ -1.31
APTX-228ENST00000486724 FAAP20Q6NZ36 180 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 TMED4Q7Z7H5 227 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 SLC25A40Q8TBP6 338 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 SECTM1Q8WVN6 248 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 SPSB1Q96BD6 273 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 SELENOIQ9C0D9 397 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 OR2J1Q9GZK6 312 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 CHST6Q9GZX3 395 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 PRO1933Q9H354 126 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 TAF9BQ9HBM6 251 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 ZNF230Q9UIE0 474 aaPredicted RBP6.88□□□□□ -1.31
APTX-228ENST00000486724 SIGLEC9Q9Y336 463 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 RHBDD3Q9Y3P4 386 aa6.88□□□□□ -1.31
APTX-228ENST00000486724 C5orf51A6NDU8 294 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 ANKRD30BLA7E2S9 258 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 IQCF6A8MYZ5 107 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 ZNF736B4DX44 427 aaPredicted RBP6.87□□□□□ -1.31
APTX-228ENST00000486724 PPP5D1E7EU14 171 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 PHOX2AO14813 284 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 CIDEAO60543 219 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 HIST1H2BKO60814 126 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 NRASP01111 189 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 IGHV1-46P01743 117 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 CSTBP04080 98 aaKnown RBP6.87□□□□□ -1.31
APTX-228ENST00000486724 CD3DP04234 171 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 HIST1H2BJP06899 126 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 ZNF735P0CB33 412 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 OR5H8P0DN80 308 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 KITLGP21583 273 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 HIST1H2BOP23527 126 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 HIST1H2BBP33778 126 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 MPV17P39210 176 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 LPAR6P43657 344 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 GNG10P50151 68 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 CLDN12P56749 244 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 HIST1H2BDP58876 126 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 HIST1H2BCP62807 126 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 RANP62826 216 aaKnown RBP6.87□□□□□ -1.31
APTX-228ENST00000486724 PRDX4Q13162 271 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 RAB11BQ15907 218 aa6.87□□□□□ -1.31
APTX-228ENST00000486724 HIST2H2BEQ16778 126 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms