RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 C2orf74A8MZ97 194 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 AP2S1P53680 142 aaPredicted RBP1.94□□□□□ -2.1
SMC4-218ENST00000486711 CDKL4Q5MAI5 379 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 SBSNQ6UWP8 590 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 OR13C8Q8NGS7 320 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 RAB8BQ92930 207 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 SFRP2Q96HF1 295 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 Q9BRP9 147 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 TTTY12Q9BZ98 90 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 OR51I2Q9H344 312 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 TAAR3PQ9P1P4 343 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 C3orf18Q9UK00 162 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 SLIT2O94813 1529 aa1.94□□□□□ -2.1
SMC4-218ENST00000486711 DOCK6Q96HP0 2047 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 A0A1W2PQD3 144 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 APOMO95445 188 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 NPYP01303 97 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 CD24P25063 80 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 RBM11P57052 281 aaKnown RBP1.93□□□□□ -2.1
SMC4-218ENST00000486711 RSU1Q15404 277 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 CLVS2Q5SYC1 327 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 C5orf46Q6UWT4 87 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 Q6ZS52 159 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 SPATA12Q7Z6I5 190 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 LHFPL1Q86WI0 220 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 ZNF283Q8N7M2 679 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 Q8NDZ9 215 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 OR4X2Q8NGF9 303 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 RAB2BQ8WUD1 216 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 RNF133Q8WVZ7 376 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 OR52B2Q96RD2 323 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 NMNAT3Q96T66 252 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 ZNF471Q9BX82 626 aaPredicted RBP1.93□□□□□ -2.1
SMC4-218ENST00000486711 MRPS26Q9BYN8 205 aaKnown RBP1.93□□□□□ -2.1
SMC4-218ENST00000486711 KLK5Q9Y337 293 aaPredicted RBP1.93□□□□□ -2.1
SMC4-218ENST00000486711 FAM215AQ9Y5M1 114 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 THSD7AQ9UPZ6 1657 aa1.93□□□□□ -2.1
SMC4-218ENST00000486711 KMT2EQ8IZD2 1858 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 DSCAML1Q8TD84 2053 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 LTBP2Q14767 1821 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 A0A087WUU8 490 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 A0A1B0GW54 56 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 C21orf140B9A014 251 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 DISC1C4P0D8 188 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 C9JCJ5 164 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 H3BRN7 92 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 ACOX3O15254 700 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 ISG15P05161 165 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 REG1AP05451 166 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 ZNF728P0DKX0 622 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 IFI30P13284 250 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 RPS12P25398 132 aaKnown RBP1.92□□□□□ -2.1
SMC4-218ENST00000486711 SLCO1A2P46721 670 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 PSMD8P48556 350 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 TAS2R20P59543 309 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 FKBP1AP62942 108 aaKnown RBP1.92□□□□□ -2.1
SMC4-218ENST00000486711 SS18Q15532 418 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 PABPC1L2AQ5JQF8 200 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 C1orf195Q5TG92 126 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 OR2T27Q8NH04 317 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 OR5J2Q8NH18 312 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 CLDND2Q8NHS1 167 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 LHFPL5Q8TAF8 219 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 GNPNAT1Q96EK6 184 aaPredicted RBP1.92□□□□□ -2.1
SMC4-218ENST00000486711 CCL13Q99616 98 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 CXCL16Q9H2A7 254 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 HRASLSQ9HDD0 168 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 CACNA1SQ13698 1873 aa1.92□□□□□ -2.1
SMC4-218ENST00000486711 C9orf84Q5VXU9 1444 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 OTOFQ9HC10 1997 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 GRIN2BQ13224 1484 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 KIF15Q9NS87 1388 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 TRGV5A0A0B4J1U4 118 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 MDFIC2A0A1B0GVS7 189 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 NIPSNAP2O75323 286 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 IGKV1-16P04430 117 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 UCHL3P15374 230 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 FXYD7P58549 80 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 AP1S1P61966 158 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 ZNF90Q03938 601 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 LGALS9BQ3B8N2 356 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 LPCAT4Q643R3 524 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 PTRHD1Q6GMV3 140 aaKnown RBP1.91□□□□□ -2.1
SMC4-218ENST00000486711 SLC35E3Q7Z769 313 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 C10orf67Q8IYJ2 551 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 PACRGLQ8N7B6 248 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 SMCR5Q8TEV8 140 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 FAM96AQ9H5X1 160 aa1.91□□□□□ -2.1
SMC4-218ENST00000486711 SMIM23A6NLE4 172 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 BHLHE40O14503 412 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 COX7A2LO14548 114 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 OVOL1O14753 267 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 DCTN3O75935 186 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 S1PR2O95136 353 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 CALB1P05937 261 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 BPGMP07738 259 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 ERHP84090 104 aaKnown RBP1.9□□□□□ -2.11
SMC4-218ENST00000486711 AKR1C1Q04828 323 aa1.9□□□□□ -2.11
SMC4-218ENST00000486711 FABP9Q0Z7S8 132 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms