RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ATP6V1B2P21281 511 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 MC5RP33032 325 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 RHOGP84095 191 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 PJVKQ0ZLH3 352 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 RIPK1Q13546 671 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 RSU1Q15404 277 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 MRGPRG-AS1Q2M3A8 158 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 MPV17LQ2QL34 196 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 ODF3L2Q3SX64 289 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 RPL39P5Q59GN2 51 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 LY6G6FQ5SQ64 297 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 ATAD3CQ5T2N8 411 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 AADACL4Q5VUY2 407 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 KRTAP5-11Q6L8G4 156 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 TRAT1Q6PIZ9 186 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 ASCL4Q6XD76 172 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 C5orf24Q7Z6I8 188 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 NR2C2APQ86WQ0 139 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 FAM223AQ8IWN6 122 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 GAPTQ8N292 157 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 STX19Q8N4C7 294 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 OR2C3Q8N628 320 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 UXS1Q8NBZ7 420 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 OR11H2Q8NH07 326 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 OR52N1Q8NH53 320 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 FAM46BQ96A09 425 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 GALNT14Q96FL9 552 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 YPEL2Q96QA6 119 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 TSNAXQ99598 290 aaKnown RBP4.76□□□□□ -1.65
SMC4-217ENST00000485867 SULT4A1Q9BR01 284 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 TEX12Q9BXU0 123 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 FAM192AQ9GZU8 254 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 HRH4Q9H3N8 390 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 MAGIXQ9H6Y5 334 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 TAF9BQ9HBM6 251 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 FGFR1OP2Q9NVK5 253 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 TRBV9A0A0B4J1U6 114 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 TRAV10A0A0B4J240 114 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 GGCTO75223 188 aaKnown RBP4.75□□□□□ -1.65
SMC4-217ENST00000485867 TUSC2O75896 110 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 OR2C1O95371 312 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 IGKV1-16P04430 117 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 OR9G9P0C7N8 305 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 OR2T7P0C7T2 308 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 APELAP0DMC3 54 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 HLA-DMBP28068 263 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 EPHA2P29317 976 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 ATP5G2Q06055 141 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 GK3PQ14409 553 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 MED22Q15528 200 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 TP53I3Q53FA7 332 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 C6orf141Q5SZD1 244 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 C1orf134Q5TEV5 83 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 NXNL2Q5VZ03 156 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 DMKNQ6E0U4 476 aaPredicted RBP4.75□□□□□ -1.65
SMC4-217ENST00000485867 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
SMC4-217ENST00000485867 Q6ZTC4 211 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 FAM220AQ7Z4H9 259 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 LINC00596Q86U02 117 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 GPHB5Q86YW7 130 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 SERPINA12Q8IW75 414 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 SLC38A6Q8IZM9 456 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 OR2AK2Q8NG84 335 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 OR10H4Q8NGA5 316 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 C18orf15Q96N68 181 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 GPER1Q99527 375 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 IL36GQ9NZH8 169 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 GNG8Q9UK08 70 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 FAT1Q14517 4588 aa4.75□□□□□ -1.65
SMC4-217ENST00000485867 A0A1W2PP11 408 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 MPTX1A8MV57 137 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 RAB29O14966 203 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 CDRT1O95170 752 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 PRH1P02810 166 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 MAS1P04201 325 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 SCTP09683 121 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 SERPINA2P20848 420 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 MAP2K4P45985 399 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 HTD2P86397 168 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 ZNF85Q03923 595 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 FAM209BQ5JX69 171 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 RBPMS2Q6ZRY4 209 aaKnown RBP4.74□□□□□ -1.65
SMC4-217ENST00000485867 C9orf47Q6ZRZ4 202 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 ZNF554Q86TJ5 538 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 HS3ST5Q8IZT8 346 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 SPARTQ8N0X7 666 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 PARP16Q8N5Y8 322 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 Q8NAQ8 132 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 OR51A2Q8NGJ7 313 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 OR5B3Q8NH48 314 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 OR4A5Q8NH83 315 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 CD300LFQ8TDQ1 290 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 CPNE2Q96FN4 548 aaPredicted RBP4.74□□□□□ -1.65
SMC4-217ENST00000485867 CYYR1Q96J86 154 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 SPAG8Q99932 426 aaPredicted RBP4.74□□□□□ -1.65
SMC4-217ENST00000485867 CSTL1Q9H114 145 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 ZNF556Q9HAH1 456 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 PIPOXQ9P0Z9 390 aa4.74□□□□□ -1.65
SMC4-217ENST00000485867 ZNF320A2RRD8 509 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 FAM90A7PA6NKC0 464 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms