RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SRSF7Q16629 238 aaKnown RBP eCLIP9.97□□□□□ -0.81
HDAC6-227ENST00000485102 MOGAT2Q3SYC2 334 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 ZNF880Q6PDB4 577 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 FAM131AQ6UXB0 335 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 C5orf24Q7Z6I8 188 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 SGPP2Q8IWX5 399 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 OR10R2Q8NGX6 335 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 SPATA25Q9BR10 227 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 AGMATQ9BSE5 352 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 LPAR5Q9H1C0 372 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 ATG5Q9H1Y0 275 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 RANGRFQ9HD47 186 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-227ENST00000485102 RHBDL2Q9NX52 303 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 SLC23A1Q9UHI7 598 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 H3BUA1 57 aa9.96□□□□□ -0.82
HDAC6-227ENST00000485102 NAPSAO96009 420 aa9.96□□□□□ -0.82
HDAC6-227ENST00000485102 IGHV3-11P01762 117 aa9.96□□□□□ -0.82
HDAC6-227ENST00000485102 CLDN12P56749 244 aa9.96□□□□□ -0.82
HDAC6-227ENST00000485102 UNQ5815/PRO19632Q6UWF5 114 aa9.96□□□□□ -0.82
HDAC6-227ENST00000485102 CASTOR1Q8WTX7 329 aa9.96□□□□□ -0.82
HDAC6-227ENST00000485102 RNF167Q9H6Y7 350 aa9.96□□□□□ -0.82
HDAC6-227ENST00000485102 SIGLEC8Q9NYZ4 499 aa9.96□□□□□ -0.82
HDAC6-227ENST00000485102 WASHC3Q9Y3C0 194 aa9.96□□□□□ -0.82
HDAC6-227ENST00000485102 A0A075B6Q4 140 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 TRBV6-6A0A0A6YYG2 114 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 H0Y980 276 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 XRCC3O43542 346 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 SPDEFO95238 335 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 CD3GP09693 182 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 S100A5P33763 92 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 CBX5P45973 191 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 TPPP2P59282 170 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 KLF5Q13887 457 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-227ENST00000485102 PLGLAQ15195 96 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 HAGHQ16775 308 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 IL34Q6ZMJ4 242 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 NR2C2APQ86WQ0 139 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 LFNGQ8NES3 379 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 LGALS14Q8TCE9 139 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 CYYR1Q96J86 154 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 SULT4A1Q9BR01 284 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 THAP7Q9BT49 309 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-227ENST00000485102 NAA50Q9GZZ1 169 aaKnown RBP9.95□□□□□ -0.82
HDAC6-227ENST00000485102 C12orf4Q9NQ89 552 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 GAB2Q9UQC2 676 aa9.95□□□□□ -0.82
HDAC6-227ENST00000485102 A0A0G2JLM5 398 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 ST8SIA5O15466 376 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 PROP1O75360 226 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 DIRAS3O95661 229 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 IFNA6P05013 189 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 CLEC2LP0C7M8 214 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 SNRPBP14678 240 aaKnown RBP9.94□□□□□ -0.82
HDAC6-227ENST00000485102 HIST1H1DP16402 221 aaKnown RBP9.94□□□□□ -0.82
HDAC6-227ENST00000485102 MRPS10P82664 201 aaKnown RBP9.94□□□□□ -0.82
HDAC6-227ENST00000485102 PSG5Q15238 335 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 RPL39P5Q59GN2 51 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 SAMD12Q8N8I0 201 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 DYNC2LI1Q8TCX1 351 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 TMEM68Q96MH6 324 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 MS4A10Q96PG2 267 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 TSNAXQ99598 290 aaKnown RBP9.94□□□□□ -0.82
HDAC6-227ENST00000485102 CMSS1Q9BQ75 279 aaKnown RBP9.94□□□□□ -0.82
HDAC6-227ENST00000485102 FAM103A1Q9BTL3 118 aaKnown RBP9.94□□□□□ -0.82
HDAC6-227ENST00000485102 RBM38Q9H0Z9 239 aaKnown RBP9.94□□□□□ -0.82
HDAC6-227ENST00000485102 CHMP1AQ9HD42 196 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-227ENST00000485102 COMMD3Q9UBI1 195 aa9.94□□□□□ -0.82
HDAC6-227ENST00000485102 PLECQ15149 4684 aaKnown RBP9.94□□□□□ -0.82
HDAC6-227ENST00000485102 RAB27BO00194 218 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 RGS5O15539 181 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 TRGV3P03979 118 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 DTYMKP23919 212 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 ARFRP1Q13795 201 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 TMEM69Q5SWH9 247 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 OR10K2Q6IF99 312 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 ADAMTSL5Q6ZMM2 481 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 LINC00299Q6ZSB3 139 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 POC5Q8NA72 575 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 OR9G4Q8NGQ1 327 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 ABHD5Q8WTS1 349 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 IL1F10Q8WWZ1 152 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 EDARADDQ8WWZ3 215 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 FAAP24Q9BTP7 215 aa9.93□□□□□ -0.82
HDAC6-227ENST00000485102 METTL1Q9UBP6 276 aaKnown RBP9.93□□□□□ -0.82
HDAC6-227ENST00000485102 SMIM30A4D0T7 59 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 DPPA5A6NC42 116 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 FAM25AB3EWG3 89 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 FAM25CB3EWG5 89 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 FAM25GB3EWG6 89 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 H7C2Y5 167 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 SULT1C2O00338 296 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 CA2P00918 260 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 MECP2P51608 486 aaKnown RBP9.92□□□□□ -0.82
HDAC6-227ENST00000485102 GNG2P59768 71 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 SPCS2Q15005 226 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 HACD4Q5VWC8 232 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 GLDNQ6ZMI3 551 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-227ENST00000485102 LINC00322Q6ZN03 302 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-227ENST00000485102 C6orf201Q7Z4U5 140 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 HAPLN4Q86UW8 402 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms