RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TMEM177Q53S58 311 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 ACTBL2Q562R1 376 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 ZNF660Q6AZW8 331 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-213ENST00000484112 LIN54Q6MZP7 749 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 DHRS11Q6UWP2 260 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 ZNF66Q6ZN08 573 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 OVCH2Q7RTZ1 564 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 ZNF329Q86UD4 541 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 STPG2Q8N412 459 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 GVQW1Q8N7I0 195 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 OSR1Q8TAX0 266 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-213ENST00000484112 DDB2Q92466 427 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 SNAPC3Q92966 411 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 MCRIP2Q9BUT9 160 aaKnown RBP7.85□□□□□ -1.15
CPSF4-213ENST00000484112 SLC35D1Q9NTN3 355 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 ZFP57Q9NU63 452 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 ZNF107Q9UII5 783 aaPredicted RBP7.85□□□□□ -1.15
CPSF4-213ENST00000484112 RBMX2Q9Y388 322 aaKnown RBP7.85□□□□□ -1.15
CPSF4-213ENST00000484112 PRELID3BQ9Y3B1 194 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 DNAH9Q9NYC9 4486 aa7.85□□□□□ -1.15
CPSF4-213ENST00000484112 CREBL2O60519 120 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-213ENST00000484112 PPYP01298 95 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 NHLRC4P0CG21 123 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-213ENST00000484112 TBPP20226 339 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 VDAC1P21796 283 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 KIR2DS2P43631 304 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 CRIP2P52943 208 aaPredicted RBP7.84□□□□□ -1.15
CPSF4-213ENST00000484112 RAB25P57735 213 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 DGCR2P98153 550 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 TEX38Q6PEX7 206 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 ETV3LQ6ZN32 361 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 C18orf65Q6ZTR6 163 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 C8orf86Q6ZUL3 223 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 TCTEX1D1Q8N7M0 179 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 OR5H2Q8NGV7 314 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 ASCL2Q99929 193 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 AIFM2Q9BRQ8 373 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 EXTL2Q9UBQ6 330 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 MRPS7Q9Y2R9 242 aaKnown RBP7.84□□□□□ -1.15
CPSF4-213ENST00000484112 A3GALT2U3KPV4 340 aa7.84□□□□□ -1.15
CPSF4-213ENST00000484112 RGS5O15539 181 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 IGLV2-14P01704 120 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 IGKV1-16P04430 117 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 ELANEP08246 267 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 PTHLHP12272 177 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 HERV-K104P61576 105 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 RPS16P62249 146 aaKnown RBP7.83□□□□□ -1.16
CPSF4-213ENST00000484112 RPL23AP62750 156 aaKnown RBP7.83□□□□□ -1.16
CPSF4-213ENST00000484112 TMEM267Q0VDI3 215 aaPredicted RBP7.83□□□□□ -1.16
CPSF4-213ENST00000484112 CATR1Q13166 79 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 PLGLAQ15195 96 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 PSG5Q15238 335 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 LPCAT3Q6P1A2 487 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 ZNF562Q6V9R5 426 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 GLDNQ6ZMI3 551 aaPredicted RBP7.83□□□□□ -1.16
CPSF4-213ENST00000484112 RNF152Q8N8N0 203 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 DRAXINQ8NBI3 349 aaPredicted RBP7.83□□□□□ -1.16
CPSF4-213ENST00000484112 OR6F1Q8NGZ6 308 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 RITA1Q96K30 269 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 TMEM68Q96MH6 324 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 DUX3Q96PT4 197 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 SLIRPQ9GZT3 109 aaKnown RBP7.83□□□□□ -1.16
CPSF4-213ENST00000484112 NXF2Q9GZY0 626 aaKnown RBP7.83□□□□□ -1.16
CPSF4-213ENST00000484112 OR51J1Q9H342 316 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 EHFQ9NZC4 300 aa7.83□□□□□ -1.16
CPSF4-213ENST00000484112 ZMAT5Q9UDW3 170 aaKnown RBP7.83□□□□□ -1.16
CPSF4-213ENST00000484112 IGHV7-81A0A0B4J1V7 117 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 IGKV1D-13A0A0B4J2D9 117 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 C3orf84H3BNL1 204 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 GABARAPH6UMI1 98 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 CTDSPLO15194 276 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 SHOXO15266 292 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 RBFOX2O43251 390 aaKnown RBP eCLIP7.82□□□□□ -1.16
CPSF4-213ENST00000484112 IGHG4P01861 327 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 IGKV1-13P0DP09 117 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 AADACP22760 399 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 MYCNOSP40205 109 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 UBE2KP61086 200 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 CFHR3Q02985 330 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 FOXE3Q13461 319 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 EIF4EBP1Q13541 118 aaPredicted RBP7.82□□□□□ -1.16
CPSF4-213ENST00000484112 VMA21Q3ZAQ7 101 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 PYHIN1Q6K0P9 492 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 LINC00299Q6ZSB3 139 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 KCTD9Q7L273 389 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 PPP1R27Q86WC6 154 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 SNX29P2Q8IUI4 249 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 LYSMD2Q8IV50 215 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 ARRDC1Q8N5I2 433 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 TEX45Q8NA69 505 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 BVESQ8NE79 360 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 KLHL30-AS1Q8NEE0 82 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 OR4S2Q8NH73 311 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 VSTM2AQ8TAG5 236 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 CD300LFQ8TDQ1 290 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 FCAMRQ8WWV6 532 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 MOB3AQ96BX8 217 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 C5orf30Q96GV9 206 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 HARBI1Q96MB7 349 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 NOL4LQ96MY1 436 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms