RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 GCN1Q92616 2671 aaKnown RBP11.47□□□□□ -0.57
CLK3-204ENST00000483723 ZNF462Q96JM2 2506 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 PPIAL4CA0A0B4J2A2 164 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 A0A1W2PPH5 198 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 IGSF23A1L1A6 192 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 MARCH11A6NNE9 402 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 WRBO00258 174 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 PPIAL4GP0DN37 164 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 EIF5AP63241 154 aaKnown RBP11.46□□□□□ -0.57
CLK3-204ENST00000483723 EWSR1Q01844 656 aaKnown RBP eCLIP11.46□□□□□ -0.573e-7■□□□□ 11.1
CLK3-204ENST00000483723 NHLH2Q02577 135 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 POU2AF1Q16633 256 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 RPL7L1Q6DKI1 246 aaKnown RBP11.46□□□□□ -0.57
CLK3-204ENST00000483723 OR4S2Q8NH73 311 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 TNFRSF14Q92956 283 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 TMEM133Q9H2Q1 129 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 WFDC1Q9HC57 220 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 ZNRD1Q9P1U0 126 aa11.46□□□□□ -0.57
CLK3-204ENST00000483723 JTBO76095 146 aa11.46□□□□□ -0.58
CLK3-204ENST00000483723 NQO2P16083 231 aa11.46□□□□□ -0.58
CLK3-204ENST00000483723 GPR6P46095 362 aaPredicted RBP11.46□□□□□ -0.58
CLK3-204ENST00000483723 TNFRSF9Q07011 255 aa11.46□□□□□ -0.58
CLK3-204ENST00000483723 UBAC2Q8NBM4 344 aa11.46□□□□□ -0.58
CLK3-204ENST00000483723 TMEM186Q96B77 213 aa11.46□□□□□ -0.58
CLK3-204ENST00000483723 MALRD1Q5VYJ5 2156 aa11.45□□□□□ -0.58
CLK3-204ENST00000483723 HRNRQ86YZ3 2850 aaPredicted RBP11.45□□□□□ -0.58
CLK3-204ENST00000483723 TXNL1O43396 289 aa11.45□□□□□ -0.58
CLK3-204ENST00000483723 MED6O75586 246 aa11.45□□□□□ -0.58
CLK3-204ENST00000483723 NXPH3O95157 252 aa11.45□□□□□ -0.58
CLK3-204ENST00000483723 IL6RP08887 468 aaPredicted RBP11.45□□□□□ -0.58
CLK3-204ENST00000483723 OR9G9P0C7N8 305 aa11.45□□□□□ -0.58
CLK3-204ENST00000483723 RPL23AP62750 156 aaKnown RBP11.45□□□□□ -0.58
CLK3-204ENST00000483723 TAGLNQ01995 201 aaKnown RBP11.45□□□□□ -0.58
CLK3-204ENST00000483723 BAXQ07812 192 aa11.45□□□□□ -0.58
CLK3-204ENST00000483723 CLEC9AQ6UXN8 241 aa11.45□□□□□ -0.58
CLK3-204ENST00000483723 ABHD12Q8N2K0 398 aa11.45□□□□□ -0.58
CLK3-204ENST00000483723 MED9Q9NWA0 146 aa11.45□□□□□ -0.58
CLK3-204ENST00000483723 C22orf46C9J442 243 aa11.44□□□□□ -0.58
CLK3-204ENST00000483723 LIPFP07098 398 aa11.44□□□□□ -0.58
CLK3-204ENST00000483723 CAV2P51636 162 aa11.44□□□□□ -0.58
CLK3-204ENST00000483723 UBE2KP61086 200 aa11.44□□□□□ -0.58
CLK3-204ENST00000483723 GNB2P62879 340 aa11.44□□□□□ -0.58
CLK3-204ENST00000483723 DHRS7BQ6IAN0 325 aaPredicted RBP11.44□□□□□ -0.58
CLK3-204ENST00000483723 OR5AN1Q8NGI8 311 aa11.44□□□□□ -0.58
CLK3-204ENST00000483723 RBKSQ9H477 322 aa11.44□□□□□ -0.58
CLK3-204ENST00000483723 HELZ2Q9BYK8 2649 aaKnown RBP11.44□□□□□ -0.58
CLK3-204ENST00000483723 IGLV1-47P01700 117 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 RRASP10301 218 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 S100A1P23297 94 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 PDLIM3Q53GG5 364 aaPredicted RBP11.43□□□□□ -0.58
CLK3-204ENST00000483723 OR52E5Q8NH55 327 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 PCNPQ8WW12 178 aaKnown RBP11.43□□□□□ -0.58
CLK3-204ENST00000483723 SSBP3Q9BWW4 388 aaPredicted RBP11.43□□□□□ -0.58
CLK3-204ENST00000483723 SMIM3Q9BZL3 60 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 SLC35D1Q9NTN3 355 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 FGF16O43320 207 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 CRYZL1O95825 349 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 ERVK-16P61578 105 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 RELBQ01201 579 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 Q8N7P7 452 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 BEND2Q8NDZ0 799 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 OR10X1Q8NGY0 326 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 NABP2Q9BQ15 211 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 GINS3Q9BRX5 216 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 PSENENQ9NZ42 101 aa11.43□□□□□ -0.58
CLK3-204ENST00000483723 LOC105371242A0A075B767 164 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 BORCS7-ASMTA0A0B4J1R7 106 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 IGHV2-26A0A0B4J1V2 119 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 hCG_1809904A0A1W2PP81 198 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 A0A1W2PPE2 198 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 A0A1W2PR64 198 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 A0A1W2PRV1 198 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 LEUTXA8MZ59 168 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 H0YJW9 148 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 M0R1W7 72 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 HRASP01112 189 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 FAM157CP0CG43 387 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 SULT1A1P50225 295 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 PRRX1P54821 245 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 RTL8BQ17RB0 113 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 FAM74A1Q5RGS3 127 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 EIF5AL1Q6IS14 154 aaKnown RBP11.42□□□□□ -0.58
CLK3-204ENST00000483723 ZNF429Q86V71 674 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 PDZD9Q8IXQ8 264 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 STPG2Q8N412 459 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 LRRC20Q8TCA0 184 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 RHOVQ96L33 236 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 PCGF1Q9BSM1 259 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 MRPL20Q9BYC9 149 aaKnown RBP11.42□□□□□ -0.58
CLK3-204ENST00000483723 TMEM140Q9NV12 185 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 CACFD1Q9UGQ2 172 aa11.42□□□□□ -0.58
CLK3-204ENST00000483723 IGHV2-5P01817 119 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 IGHV4-39P01824 125 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 IAPPP10997 89 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 IL3RAP26951 378 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 DYNLT3P51808 116 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 HLA-DRB5Q30154 266 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 TMEM177Q53S58 311 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 TMEM14EPQ6UXP3 125 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms