RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 KHDC1LQ5JSQ8 128 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 ZNF66Q6ZN08 573 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 KCTD9Q7L273 389 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 PPP1R27Q86WC6 154 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 ZBTB34Q8NCN2 500 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 DYNC2LI1Q8TCX1 351 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 TPSG1Q9NRR2 321 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 SCOCQ9UIL1 159 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 MRPS7Q9Y2R9 242 aaKnown RBP14.09□□□□□ -0.15
HDAC6-225ENST00000483506 FBXO7Q9Y3I1 522 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 FAM25AB3EWG3 89 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 FAM25CB3EWG5 89 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 FAM25GB3EWG6 89 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 G3V318 75 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 H3BMQ9 156 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 SHOXO15266 292 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 CRYZL1O95825 349 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 CA2P00918 260 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 RPLP1P05386 114 aaKnown RBP14.08□□□□□ -0.16
HDAC6-225ENST00000483506 PF4V1P10720 104 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 RPL30P62888 115 aaKnown RBP14.08□□□□□ -0.16
HDAC6-225ENST00000483506 SNX29P2Q8IUI4 249 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 LYSMD2Q8IV50 215 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 TCTEX1D1Q8N7M0 179 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 WFDC9Q8NEX5 89 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 ISOC1Q96CN7 298 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 MIXL1Q9H2W2 232 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 EHFQ9NZC4 300 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 PRELID3BQ9Y3B1 194 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 NUBP2Q9Y5Y2 271 aa14.08□□□□□ -0.16
HDAC6-225ENST00000483506 RCVRNP35243 200 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 CDX1P47902 265 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-225ENST00000483506 RFX2P48378 723 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 UBE2KP61086 200 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 SSBP2P81877 361 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-225ENST00000483506 MRGPRG-AS1Q2M3A8 158 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 ETV3LQ6ZN32 361 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 ZNF695Q8IW36 515 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 MFSD4AQ8N468 514 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 TEX45Q8NA69 505 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 OR5H2Q8NGV7 314 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 C15orf40Q8WUR7 153 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 SECTM1Q8WVN6 248 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 CCL28Q9NRJ3 127 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 EXTL2Q9UBQ6 330 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 WSB1Q9Y6I7 421 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 CEPT1Q9Y6K0 416 aa14.07□□□□□ -0.16
HDAC6-225ENST00000483506 TNCP24821 2201 aa14.06□□□□□ -0.16
HDAC6-225ENST00000483506 ARPC1BO15143 372 aaKnown RBP14.06□□□□□ -0.16
HDAC6-225ENST00000483506 NOL3O60936 208 aaKnown RBP14.06□□□□□ -0.16
HDAC6-225ENST00000483506 FCGR3BO75015 233 aa14.06□□□□□ -0.16
HDAC6-225ENST00000483506 BRWD1-AS2P59051 145 aa14.06□□□□□ -0.16
HDAC6-225ENST00000483506 VMA21Q3ZAQ7 101 aa14.06□□□□□ -0.16
HDAC6-225ENST00000483506 AKIRIN2Q53H80 203 aa14.06□□□□□ -0.16
HDAC6-225ENST00000483506 C18orf65Q6ZTR6 163 aa14.06□□□□□ -0.16
HDAC6-225ENST00000483506 ARPC1AQ92747 370 aa14.06□□□□□ -0.16
HDAC6-225ENST00000483506 MOB3AQ96BX8 217 aa14.06□□□□□ -0.16
HDAC6-225ENST00000483506 CLCC1Q96S66 551 aa14.06□□□□□ -0.16
HDAC6-225ENST00000483506 SLC5A7Q9GZV3 580 aa14.06□□□□□ -0.16
HDAC6-225ENST00000483506 CTDSP2O14595 271 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 PMP2P02689 132 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 HRH1P35367 487 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 KIR2DS2P43631 304 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 HERV-K104P61576 105 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 TMEM267Q0VDI3 215 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-225ENST00000483506 KIAA0141Q14154 515 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-225ENST00000483506 ECSCRQ19T08 205 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 SAMD5Q5TGI4 173 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 ZNF818PQ6ZRF7 136 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 LCNL1Q6ZST4 164 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 LAX1Q8IWV1 398 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 KLHL30-AS1Q8NEE0 82 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 OR4S2Q8NH73 311 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 BORCS5Q969J3 196 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 ABHD1Q96SE0 405 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 TAS2R8Q9NYW2 309 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 FOXA2Q9Y261 457 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-225ENST00000483506 DNAH3Q8TD57 4116 aa14.05□□□□□ -0.16
HDAC6-225ENST00000483506 RBFOX2O43251 390 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDAC6-225ENST00000483506 SOX15O60248 233 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 PF4P02776 101 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 HLA-DMAP28067 261 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 GNRHRP30968 328 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 FXYD4P59646 89 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 PJVKQ0ZLH3 352 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 FXYD3Q14802 87 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 KPRPQ5T749 579 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-225ENST00000483506 C8orf86Q6ZUL3 223 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 LINC00482Q8N8I6 264 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 OR5M8Q8NGP6 311 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 TCTEX1D2Q8WW35 142 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 UBE2E2Q96LR5 201 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 P2RX4Q99571 388 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 ZNF2Q9BSG1 426 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-225ENST00000483506 SLIRPQ9GZT3 109 aaKnown RBP14.04□□□□□ -0.16
HDAC6-225ENST00000483506 KLK15Q9H2R5 256 aa14.04□□□□□ -0.16
HDAC6-225ENST00000483506 NUDT19A8MXV4 375 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 RGS5O15539 181 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 SAA1P0DJI8 122 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-225ENST00000483506 MYCNOSP40205 109 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms