RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 ZNF675Q8TD23 568 aa0.41□□□□□ -2.34
KDM1A-204ENST00000481879 SLC7A6Q92536 515 aa0.41□□□□□ -2.34
KDM1A-204ENST00000481879 C12orf43Q96C57 262 aaKnown RBP0.41□□□□□ -2.34
KDM1A-204ENST00000481879 TMA16Q96EY4 203 aaKnown RBP0.41□□□□□ -2.34
KDM1A-204ENST00000481879 CPNE2Q96FN4 548 aaPredicted RBP0.41□□□□□ -2.34
KDM1A-204ENST00000481879 TMEM109Q9BVC6 243 aa0.41□□□□□ -2.34
KDM1A-204ENST00000481879 TMEM222Q9H0R3 208 aa0.41□□□□□ -2.34
KDM1A-204ENST00000481879 METTL9Q9H1A3 318 aa0.41□□□□□ -2.34
KDM1A-204ENST00000481879 CST9LQ9H4G1 147 aa0.41□□□□□ -2.34
KDM1A-204ENST00000481879 NRBP2Q9NSY0 501 aa0.41□□□□□ -2.34
KDM1A-204ENST00000481879 EMC3Q9P0I2 261 aa0.41□□□□□ -2.34
KDM1A-204ENST00000481879 TIMM9Q9Y5J7 89 aa0.41□□□□□ -2.34
KDM1A-204ENST00000481879 KIAA0232Q92628 1395 aa0.41□□□□□ -2.34
KDM1A-204ENST00000481879 YLPM1P49750 1951 aaKnown RBP0.41□□□□□ -2.34
KDM1A-204ENST00000481879 ZNF469Q96JG9 3925 aaPredicted RBP0.41□□□□□ -2.34
KDM1A-204ENST00000481879 RTTNQ86VV8 2226 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 OR6C6A6NF89 314 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 HMSDA8MTL9 139 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 SMLR1H3BR10 107 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 GOLGA8RI6L899 631 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 MRPS14O60783 128 aaKnown RBP0.4□□□□□ -2.35
KDM1A-204ENST00000481879 ATP6V1G2O95670 118 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 HLA-DQB2P05538 268 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 SERPINA7P05543 415 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 LINC00614P0C842 121 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 PRB4P10163 310 aaPredicted RBP0.4□□□□□ -2.35
KDM1A-204ENST00000481879 RPL27AP46776 148 aaKnown RBP0.4□□□□□ -2.35
KDM1A-204ENST00000481879 TBPL1P62380 186 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 MIAQ16674 131 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 CLEC12BQ2HXU8 276 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 DNAL1Q4LDG9 190 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 SAPCD1Q5SSQ6 148 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 OR52E4Q8NGH9 312 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 ZNF514Q96K75 400 aaPredicted RBP0.4□□□□□ -2.35
KDM1A-204ENST00000481879 NSRP1Q9H0G5 558 aaKnown RBP0.4□□□□□ -2.35
KDM1A-204ENST00000481879 KIAA2026Q5HYC2 2103 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 MDN1Q9NU22 5596 aa0.4□□□□□ -2.35
KDM1A-204ENST00000481879 A0A0D9SEW6 157 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 TMEM269A0A1B0GVZ9 245 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 C9JCJ5 164 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 MKRN2OSH3BPM6 223 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 H7C2G1 150 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 ORC5O43913 435 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 MT-CO2P00403 227 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 RPSAP08865 295 aaKnown RBP0.39□□□□□ -2.35
KDM1A-204ENST00000481879 LGALS1P09382 135 aaKnown RBP0.39□□□□□ -2.35
KDM1A-204ENST00000481879 CA5AP35218 305 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 RPL28P46779 137 aaKnown RBP0.39□□□□□ -2.35
KDM1A-204ENST00000481879 ETV1P50549 477 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 CLDN12P56749 244 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 TPI1P60174 286 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 FABP5Q01469 135 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 HLA-DRB5Q30154 266 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 ARHGAP11BQ3KRB8 267 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 FAM173BQ6P4H8 233 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 NAA40Q86UY6 237 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 Q8N2B8 174 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 C17orf78Q8N4C9 275 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 SPERTQ8NA61 448 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 LFNGQ8NES3 379 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 OR5L1Q8NGL2 311 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 OR5AK3PQ8NH89 298 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 RAB2BQ8WUD1 216 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 LRRC45Q96CN5 670 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 MS4A6EQ96DS6 147 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 ODF3Q96PU9 254 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 RBP7Q96R05 134 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 ADAT1Q9BUB4 502 aaKnown RBP0.39□□□□□ -2.35
KDM1A-204ENST00000481879 C1orf109Q9NX04 203 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 CHMP5Q9NZZ3 219 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 NAT8Q9UHE5 227 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 PCYT1BQ9Y5K3 369 aaPredicted RBP0.39□□□□□ -2.35
KDM1A-204ENST00000481879 DSCAML1Q8TD84 2053 aa0.39□□□□□ -2.35
KDM1A-204ENST00000481879 DISP1Q96F81 1524 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 BAZ2BQ9UIF8 2168 aaKnown RBP0.38□□□□□ -2.35
KDM1A-204ENST00000481879 CACNA1SQ13698 1873 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 TRAV7A0A075B6U4 112 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 TRAV38-1A0A0B4J264 116 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 A0A0J9YW62 118 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 F8W036 122 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 K7ERQ8 282 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 CREBL2O60519 120 aaPredicted RBP0.38□□□□□ -2.35
KDM1A-204ENST00000481879 MIPP30301 263 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 TAS2R20P59543 309 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 RAB14P61106 215 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 BTN3A2P78410 334 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 SLAMF1Q13291 335 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 PMS2P3Q13401 168 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 LRRC26Q2I0M4 334 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 RASSF6Q6ZTQ3 369 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 SPATA24Q86W54 205 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 C19orf60Q96EN9 201 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 TREM1Q9NP99 234 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 ZNHIT6Q9NWK9 470 aaKnown RBP0.38□□□□□ -2.35
KDM1A-204ENST00000481879 C22orf24Q9Y442 160 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 CCDC88CQ9P219 2028 aa0.38□□□□□ -2.35
KDM1A-204ENST00000481879 ARHGAP32A7KAX9 2087 aa0.37□□□□□ -2.35
KDM1A-204ENST00000481879 ABCC12Q96J65 1359 aa0.37□□□□□ -2.35
KDM1A-204ENST00000481879 MEIKINA0A087WXM9 373 aa0.37□□□□□ -2.35
KDM1A-204ENST00000481879 IGKV2D-26A0A0A0MRZ7 120 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms