RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 THBS3P49746 956 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 ERVK-16P61578 105 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 NCR3LG1Q68D85 454 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 TCF23Q7RTU1 214 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 OR2G3Q8NGZ4 309 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 OR4S2Q8NH73 311 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 R3HDM4Q96D70 268 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 HIPK2Q9H2X6 1198 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 C19orf12Q9NSK7 152 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 DYSFO75923 2080 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 UBR5O95071 2799 aaPredicted RBP12.99□□□□□ -0.33
RXRA-202ENST00000481739 HRNRQ86YZ3 2850 aaPredicted RBP12.99□□□□□ -0.33
RXRA-202ENST00000481739 BTBD17A6NE02 478 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 PROP1O75360 226 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 APOC3P02656 99 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 NDUFB7P17568 137 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 LRRC10Q5BKY1 277 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 TMEM14EPQ6UXP3 125 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 ZNF439Q8NDP4 499 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 SH3BGRL3Q9H299 93 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 RBKSQ9H477 322 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 DSCAMO60469 2012 aa12.99□□□□□ -0.33
RXRA-202ENST00000481739 TNFRSF13BO14836 293 aaPredicted RBP12.98□□□□□ -0.33
RXRA-202ENST00000481739 NDUFB3O43676 98 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 FCGR3BO75015 233 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 IAPPP10997 89 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 DAOP14920 347 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 NQO2P16083 231 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 ZNF134P52741 427 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 DVL1P1P54792 670 aaPredicted RBP12.98□□□□□ -0.33
RXRA-202ENST00000481739 RPL31P62899 125 aaKnown RBP12.98□□□□□ -0.33
RXRA-202ENST00000481739 ZNF616Q08AN1 781 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 ATP6V1FQ16864 119 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 CT45A1Q5HYN5 189 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 C10orf91Q5T1B1 145 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 SLC25A24Q6NUK1 477 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 DUX4L9Q6RFH8 374 aaPredicted RBP12.98□□□□□ -0.33
RXRA-202ENST00000481739 SVBPQ8N300 66 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 OR52E5Q8NH55 327 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 CT45A3Q8NHU0 189 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 SUN5Q8TC36 379 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 DDB2Q92466 427 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 CCL17Q92583 94 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 SEC11CQ9BY50 192 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 DCAF16Q9NXF7 216 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
RXRA-202ENST00000481739 ARFGEF3Q5TH69 2177 aa12.98□□□□□ -0.33
RXRA-202ENST00000481739 SPTAN1Q13813 2472 aaKnown RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 MEX3AA1L020 520 aaKnown RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 H3BP45 60 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 TMEM182Q6ZP80 229 aaPredicted RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 SLC25A48Q6ZT89 311 aaKnown RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 SCGB1C1Q8TD33 95 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 DTD1Q8TEA8 209 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 PSMG3Q9BT73 122 aaPredicted RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 TREM1Q9NP99 234 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 UQCC1Q9NVA1 299 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 USF3Q68DE3 2245 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 IGHV1-69-2A0A0G2JMI3 117 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 A6NNC1 897 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 RBMXL2O75526 392 aaKnown RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 CD5P06127 495 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 MRPS11P82912 194 aaKnown RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 TMEM267Q0VDI3 215 aaPredicted RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 PDLIM3Q53GG5 364 aaPredicted RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 SPANXN5Q5MJ07 72 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 HEPN1Q6WQI6 88 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 TGIF2LYQ8IUE0 185 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 LILRB2Q8N423 598 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 PINX1Q96BK5 328 aaKnown RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 ZNF714Q96N38 554 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 PBDC1Q9BVG4 233 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 SMDT1Q9H4I9 107 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 UBTD1Q9HAC8 227 aa12.97□□□□□ -0.33
RXRA-202ENST00000481739 KLF2Q9Y5W3 355 aaPredicted RBP12.97□□□□□ -0.33
RXRA-202ENST00000481739 SAA2-SAA4A0A096LPE2 208 aa12.96□□□□□ -0.33
RXRA-202ENST00000481739 METTL15P1P0C7V9 234 aa12.96□□□□□ -0.33
RXRA-202ENST00000481739 SAA2P0DJI9 122 aaPredicted RBP12.96□□□□□ -0.33
RXRA-202ENST00000481739 SNCAP37840 140 aa12.96□□□□□ -0.33
RXRA-202ENST00000481739 HFEQ30201 348 aa12.96□□□□□ -0.33
RXRA-202ENST00000481739 RPL39P5Q59GN2 51 aa12.96□□□□□ -0.33
RXRA-202ENST00000481739 AKR1C8PQ5T2L2 129 aa12.96□□□□□ -0.33
RXRA-202ENST00000481739 DHRS7BQ6IAN0 325 aaPredicted RBP12.96□□□□□ -0.33
RXRA-202ENST00000481739 ZNF525Q8N782 197 aa12.96□□□□□ -0.33
RXRA-202ENST00000481739 C8orf31Q8N9H6 132 aa12.96□□□□□ -0.33
RXRA-202ENST00000481739 AIFM2Q9BRQ8 373 aa12.96□□□□□ -0.33
RXRA-202ENST00000481739 CBLN4Q9NTU7 201 aa12.96□□□□□ -0.33
RXRA-202ENST00000481739 DSCAML1Q8TD84 2053 aa12.96□□□□□ -0.34
RXRA-202ENST00000481739 TANC2Q9HCD6 1990 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 A0A1B0GW64 132 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 RNASEK-C17orf49H0YIS7 233 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 SLC31A2O15432 143 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 PPIHO43447 177 aaKnown RBP12.95□□□□□ -0.34
RXRA-202ENST00000481739 NFYBP25208 207 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 PPOXP50336 477 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 SPCS3P61009 180 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 RPP30P78346 268 aaKnown RBP12.95□□□□□ -0.34
RXRA-202ENST00000481739 SERF2P84101 59 aa12.95□□□□□ -0.34
RXRA-202ENST00000481739 TAGLNQ01995 201 aaKnown RBP12.95□□□□□ -0.34
RXRA-202ENST00000481739 PRAMEF5Q5TYX0 476 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms