RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 A0A1B0GUS0 222 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 OR5H14A6NHG9 310 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 ST8SIA5O15466 376 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 PFDN1O60925 122 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 IGKV1D-33P01593 117 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 IGKV1-33P01594 117 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 OR4E1P0C645 316 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 AADACP22760 399 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 NFYAP23511 347 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-213ENST00000481019 BRS3P32247 399 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 BCAP31P51572 246 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 ZNF137PP52743 207 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 SHISA2Q6UWI4 295 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 GLDNQ6ZMI3 551 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-213ENST00000481019 TMED4Q7Z7H5 227 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 MOB3BQ86TA1 216 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 LYG1Q8N1E2 194 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 OR4C13Q8NGP0 309 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 RBM14Q96PK6 669 aaKnown RBP9.74□□□□□ -0.85
PTPRF-213ENST00000481019 SLC25A33Q9BSK2 321 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 ABHD14AQ9BUJ0 271 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 NPFFR1Q9GZQ6 430 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 SLC5A7Q9GZV3 580 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 RANBP3Q9H6Z4 567 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-213ENST00000481019 RAB18Q9NP72 206 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 RDH8Q9NYR8 311 aa9.74□□□□□ -0.85
PTPRF-213ENST00000481019 C7orf66A4D0T2 115 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 GPR31O00270 319 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 SSNA1O43805 119 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 OR2F2O95006 317 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 GAPDHP04406 335 aaKnown RBP9.73□□□□□ -0.85
PTPRF-213ENST00000481019 FXYD4P59646 89 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 CCDC144NLQ6NUI1 221 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 KCTD9Q7L273 389 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 THNSL2Q86YJ6 484 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 OR8H3Q8N146 312 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 Q8N6K4 173 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 OR2AK2Q8NG84 335 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 PPP1R14BQ96C90 147 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 RITA1Q96K30 269 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 PHB2Q99623 299 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 ZNF251Q9BRH9 671 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 RSRP1Q9BUV0 290 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 MRPL20Q9BYC9 149 aaKnown RBP9.73□□□□□ -0.85
PTPRF-213ENST00000481019 MED28Q9H204 178 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 OR51J1Q9H342 316 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 PITPNC1Q9UKF7 332 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 FLVCR2Q9UPI3 526 aa9.73□□□□□ -0.85
PTPRF-213ENST00000481019 hCG_2014768A0A024R1R8 64 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 SAA2-SAA4A0A096LPE2 208 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 TEX13DA0A0J9YY54 714 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-213ENST00000481019 HMX3A6NHT5 357 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 PROP1O75360 226 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 SAA2P0DJI9 122 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-213ENST00000481019 AKR1C4P17516 323 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 ANXA7P20073 488 aaKnown RBP9.72□□□□□ -0.85
PTPRF-213ENST00000481019 LINC00205P59089 165 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 RND3P61587 244 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 SRPXP78539 464 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 DHODHQ02127 395 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 CBX3Q13185 183 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 EBI3Q14213 229 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 RPL39P5Q59GN2 51 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 LIN54Q6MZP7 749 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 ZNF833PQ6ZTB9 187 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 LYG2Q86SG7 212 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 KLHDC1Q8N7A1 406 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 TCTEX1D1Q8N7M0 179 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 C11orf44Q8N8P7 122 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 COQ8AQ8NI60 647 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 ZNF431Q8TF32 576 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-213ENST00000481019 WIPF2Q8TF74 440 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-213ENST00000481019 CHAC2Q8WUX2 184 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 SECTM1Q8WVN6 248 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 ASB13Q8WXK3 278 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 ABHD14BQ96IU4 210 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 EAF1Q96JC9 268 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-213ENST00000481019 AGMATQ9BSE5 352 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 ZNF221Q9UK13 617 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 RNF150Q9ULK6 438 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 GAB2Q9UQC2 676 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 VSIG4Q9Y279 399 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 ALG5Q9Y673 324 aa9.72□□□□□ -0.85
PTPRF-213ENST00000481019 A0A0B4J2A0 478 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 DUS4LO95620 317 aaKnown RBP9.71□□□□□ -0.86
PTPRF-213ENST00000481019 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.86
PTPRF-213ENST00000481019 FAM106CPP0CH98 169 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 VSIG10L2P0DP72 767 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 TMEM11P17152 192 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 IL3RAP26951 378 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 PIGPP57054 158 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 RRAS2P62070 204 aaPredicted RBP9.71□□□□□ -0.86
PTPRF-213ENST00000481019 HES1Q14469 280 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 C10orf99Q6UWK7 81 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 TGIF2LXQ8IUE1 241 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 CADM3Q8N126 398 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 C5orf56Q8N8D9 126 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.71□□□□□ -0.86
PTPRF-213ENST00000481019 BVESQ8NE79 360 aa9.71□□□□□ -0.86
PTPRF-213ENST00000481019 OR2T6Q8NHC8 308 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 462.4 ms