RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 CCKARP32238 428 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 ATP5G3P48201 142 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 OR5A2Q8NGI9 324 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 NEIL1Q96FI4 390 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 NAGKQ9UJ70 344 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 TIMM9Q9Y5J7 89 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 TRAPPC1Q9Y5R8 145 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 KIR2DL5BA0A0G2JN68 375 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 KIR2DL5BA0A0G2JPC4 375 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 CDX4O14627 284 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 DEGS1O15121 323 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 ZG16O60844 167 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 MT-CO3P00414 261 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 SRP14P37108 136 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 LINC00205P59089 165 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 GNB1P62873 340 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 ZNF816Q0VGE8 651 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 KIR2DL5AQ8N109 375 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 NPCDR1Q9BY65 106 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 LIN7CQ9NUP9 197 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 B4GALT7Q9UBV7 327 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 EP300Q09472 2414 aaPredicted RBP11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 TMEM210A6NLX4 147 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 MLNRO43193 412 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 RPL30P62888 115 aaKnown RBP11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 NRN1LQ496H8 165 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 AARDQ4LEZ3 155 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 Q6P435 159 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 WDR86Q86TI4 376 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 MDP1Q86V88 176 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 C5orf30Q96GV9 206 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 TMEM204Q9BSN7 226 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 TRAPPC2LQ9UL33 140 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 RBFOX2O43251 390 aaKnown RBP eCLIP11.15□□□□□ -0.62
PDZRN3-208ENST00000479530 NDUFB4O95168 129 aa11.15□□□□□ -0.62
PDZRN3-208ENST00000479530 SP1P08047 785 aa11.15□□□□□ -0.62
PDZRN3-208ENST00000479530 TMEM144Q7Z5S9 345 aa11.15□□□□□ -0.62
PDZRN3-208ENST00000479530 MS4A10Q96PG2 267 aa11.15□□□□□ -0.62
PDZRN3-208ENST00000479530 TBX15Q96SF7 602 aa11.15□□□□□ -0.62
PDZRN3-208ENST00000479530 MANBALQ9NQG1 85 aa11.15□□□□□ -0.62
PDZRN3-208ENST00000479530 HSPB7Q9UBY9 170 aa11.15□□□□□ -0.62
PDZRN3-208ENST00000479530 PXMP4Q9Y6I8 212 aa11.15□□□□□ -0.62
PDZRN3-208ENST00000479530 TRAV38-1A0A0B4J264 116 aa11.15□□□□□ -0.63
PDZRN3-208ENST00000479530 ODAMA1E959 279 aa11.15□□□□□ -0.63
PDZRN3-208ENST00000479530 ZNF705FA8MVS1 300 aaPredicted RBP11.15□□□□□ -0.63
PDZRN3-208ENST00000479530 TFF1P04155 84 aa11.15□□□□□ -0.63
PDZRN3-208ENST00000479530 WNT2P09544 360 aa11.15□□□□□ -0.63
PDZRN3-208ENST00000479530 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.63
PDZRN3-208ENST00000479530 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.63
PDZRN3-208ENST00000479530 HNF1AP20823 631 aa11.15□□□□□ -0.63
PDZRN3-208ENST00000479530 ZNF808Q8N4W9 903 aaPredicted RBP11.15□□□□□ -0.63
PDZRN3-208ENST00000479530 SPRR3Q9UBC9 169 aa11.15□□□□□ -0.63
PDZRN3-208ENST00000479530 TRBV20OR9-2A0A075B6H5 130 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 KCNIP4Q6PIL6 250 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 ZNF705AQ6ZN79 300 aaPredicted RBP11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 IMMP2LQ96T52 175 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 ZPBPQ9BS86 351 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 TMEM147Q9BVK8 224 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 TP53TG3Q9ULZ0 132 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 TTC28Q96AY4 2481 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 NPIPB11E5RHQ5 1161 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 TNFSF15O95150 251 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 OR2H2O95918 312 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 HPRT1P00492 218 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 NPSP0C0P6 89 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 COX5AP20674 150 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 ADMP35318 185 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 BRWD1-AS2P59051 145 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 PPP1CBP62140 327 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 SRSF6Q13247 344 aaKnown RBP11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 MCEMP1Q8IX19 187 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 TMEM208Q9BTX3 173 aa11.14□□□□□ -0.63
PDZRN3-208ENST00000479530 S1PR2O95136 353 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 VENTXO95231 258 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 LINC00310P59036 64 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 LCN2P80188 198 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 PLP2Q04941 152 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 Q6ZWC4 215 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 Q8N7P7 452 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 SGMS2Q8NHU3 365 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 WDYHV1Q96HA8 205 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 LRRC30A6NM36 301 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 SP9P0CG40 484 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 IRF2P14316 349 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 CEBPDP49716 269 aaPredicted RBP11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 ZNF497Q6ZNH5 498 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 GCNT2Q8N0V5 402 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 OR10P1Q8NGE3 313 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 BCL2L2Q92843 193 aaPredicted RBP11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 GOLT1BQ9Y3E0 138 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 MGAQ8IWI9 3026 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 PCNX2A6NKB5 2137 aa11.13□□□□□ -0.63
PDZRN3-208ENST00000479530 ANKRD30BLA7E2S9 258 aa11.12□□□□□ -0.63
PDZRN3-208ENST00000479530 OR10J1P30954 320 aa11.12□□□□□ -0.63
PDZRN3-208ENST00000479530 ARR3P36575 388 aa11.12□□□□□ -0.63
PDZRN3-208ENST00000479530 GNG3P63215 75 aa11.12□□□□□ -0.63
PDZRN3-208ENST00000479530 LINC00596Q86U02 117 aa11.12□□□□□ -0.63
PDZRN3-208ENST00000479530 ZNF573Q86YE8 665 aa11.12□□□□□ -0.63
PDZRN3-208ENST00000479530 MDS2Q8NDY4 140 aa11.12□□□□□ -0.63
PDZRN3-208ENST00000479530 ELOVL5Q9NYP7 299 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms