RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 UFSP2Q9NUQ7 469 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 METRNQ9UJH8 293 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 ST8SIA5O15466 376 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 GATCO43716 136 aaKnown RBP20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 DUTP33316 252 aaKnown RBP20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 CFHR2P36980 270 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 GPR12P47775 334 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 SPCS3P61009 180 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 VWA1Q6PCB0 445 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 LRRC29Q8WV35 223 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 FAM186AA6NE01 2351 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 FRYLO94915 3013 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 KNTC1P50748 2209 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 TRAV17A0A0B4J275 112 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 IGHV2OR16-5A0A0B4J2B6 119 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 CDC34P49427 236 aaPredicted RBP20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 P2RY6Q15077 328 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 FAM209BQ5JX69 171 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 CD177Q8N6Q3 437 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 PFDN5Q99471 154 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 VPS13AQ96RL7 3174 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 YPEL1O60688 119 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 HIST1H1BP16401 226 aaKnown RBP20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 FABP6P51161 128 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 YPEL2Q96QA6 119 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 MSL2Q9HCI7 577 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 OR6C3Q9NZP0 311 aa20.49■□□□□ 0.87
SYNGAP1-206ENST00000479510 CHD3Q12873 2000 aaKnown RBP20.48■□□□□ 0.87
SYNGAP1-206ENST00000479510 HRASP01112 189 aa20.48■□□□□ 0.87
SYNGAP1-206ENST00000479510 CD1BP29016 333 aa20.48■□□□□ 0.87
SYNGAP1-206ENST00000479510 GALR1P47211 349 aa20.48■□□□□ 0.87
SYNGAP1-206ENST00000479510 GFI1BQ5VTD9 330 aa20.48■□□□□ 0.87
SYNGAP1-206ENST00000479510 OR4X1Q8NH49 305 aa20.48■□□□□ 0.87
SYNGAP1-206ENST00000479510 QTRT1Q9BXR0 403 aaKnown RBP20.48■□□□□ 0.87
SYNGAP1-206ENST00000479510 SRRM5B3KS81 715 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 MGST3O14880 152 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 PDE6DO43924 150 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 SRP14P37108 136 aaKnown RBP20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 KIR2DS2P43631 304 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 COA6Q5JTJ3 125 aaKnown RBP20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 Q8N7P7 452 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 RFESDQ8TAC1 157 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 SNX22Q96L94 193 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 TXNDC17Q9BRA2 123 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 IGHV3-43A0A0B4J1X8 118 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 IGHV3-43DP0DP04 118 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 TMPRSS3P57727 454 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 TMEM183AQ8IXX5 376 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 NCOR1P1Q9H4R4 102 aa20.47■□□□□ 0.87
SYNGAP1-206ENST00000479510 AHRRA9YTQ3 701 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 HMGB3O15347 200 aaKnown RBP20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 PAGE4O60829 102 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 CD99P14209 185 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 FAM3BP58499 235 aaPredicted RBP20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 MORN2Q502X0 79 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 TPRX1Q8N7U7 411 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 ZNF383Q8NA42 475 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 ZMAT5Q9UDW3 170 aaKnown RBP20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 GAB2Q9UQC2 676 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 IGHV1-18A0A0C4DH31 117 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 PPP5D1E7EU14 171 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 ITGB1BP1O14713 200 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 GYPAP02724 150 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 OR9G9P0C7N8 305 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 CCL11P51671 97 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 TRIP6Q15654 476 aaKnown RBP20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 FDCSPQ8NFU4 85 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 BTF3L4Q96K17 158 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 GFOD1Q9NXC2 390 aa20.46■□□□□ 0.87
SYNGAP1-206ENST00000479510 USF3Q68DE3 2245 aa20.45■□□□□ 0.86
SYNGAP1-206ENST00000479510 C11orf94C9JXX5 98 aa20.45■□□□□ 0.86
SYNGAP1-206ENST00000479510 F2RL2O00254 374 aa20.45■□□□□ 0.86
SYNGAP1-206ENST00000479510 ERVK-16P61578 105 aa20.45■□□□□ 0.86
SYNGAP1-206ENST00000479510 HNF4GQ14541 408 aa20.45■□□□□ 0.86
SYNGAP1-206ENST00000479510 OR4A16Q8NH70 328 aa20.45■□□□□ 0.86
SYNGAP1-206ENST00000479510 ZNF71Q9NQZ8 489 aaPredicted RBP20.45■□□□□ 0.86
SYNGAP1-206ENST00000479510 GNG12Q9UBI6 72 aa20.45■□□□□ 0.86
SYNGAP1-206ENST00000479510 DEFB108AA8MXU0 73 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 GGCTO75223 188 aaKnown RBP20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 TFF1P04155 84 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 TYMSP04818 313 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 OPRK1P41145 380 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 C4orf17Q53FE4 359 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 PRAMEF5Q5TYX0 476 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 RAB9BQ9NP90 201 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 KCNIP2Q9NS61 270 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 PROCRQ9UNN8 238 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 F6UZH7 168 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 TMPRSS2O15393 492 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 NKX2-8O15522 239 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 FCGR3BO75015 233 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 BHLHA15Q7RTS1 189 aaPredicted RBP20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 RNASEH2CQ8TDP1 164 aaKnown RBP20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 GATAD1Q8WUU5 269 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 ACY3Q96HD9 319 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 FZR1Q9UM11 496 aa20.44■□□□□ 0.86
SYNGAP1-206ENST00000479510 GPR179Q6PRD1 2367 aa20.43■□□□□ 0.86
SYNGAP1-206ENST00000479510 IGKV1D-17A0A075B6S4 117 aa20.43■□□□□ 0.86
SYNGAP1-206ENST00000479510 PROP1O75360 226 aa20.43■□□□□ 0.86
SYNGAP1-206ENST00000479510 FABP4P15090 132 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms