RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 K7N7A8 449 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 SH2D1BO14796 132 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 LY86O95711 162 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 MBP02144 154 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 ARG1P05089 322 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 OR4E1P0C645 316 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 ZNF728P0DKX0 622 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 ZNF19P17023 458 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 AKR1C2P52895 323 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 AKR1C1Q04828 323 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 MEF2CQ06413 473 aaPredicted RBP5.38□□□□□ -1.55
VCP-205ENST00000479300 CDK5R1Q15078 307 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 RNASE10Q5GAN6 216 aaKnown RBP5.38□□□□□ -1.55
VCP-205ENST00000479300 CRIP3Q6Q6R5 217 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 SSX6Q7RTT6 188 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 MRPL52Q86TS9 123 aaKnown RBP5.38□□□□□ -1.55
VCP-205ENST00000479300 FAM58AQ8N1B3 248 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 RPS4Y2Q8TD47 263 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 TNFRSF14Q92956 283 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 FGGYQ96C11 551 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 AJUBAQ96IF1 538 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 ZNF714Q96N38 554 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 GPR61Q9BZJ8 451 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 COMMD4Q9H0A8 199 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 MEGF9Q9H1U4 602 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 GAL3ST2Q9H3Q3 398 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.38□□□□□ -1.55
VCP-205ENST00000479300 KLK11Q9UBX7 282 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 HHLA2Q9UM44 414 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 TBL2Q9Y4P3 447 aaKnown RBP5.38□□□□□ -1.55
VCP-205ENST00000479300 TENM2Q9NT68 2774 aa5.38□□□□□ -1.55
VCP-205ENST00000479300 TRGV10A0A0A0MS01 117 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 ZNF705EA8MWA4 302 aaPredicted RBP5.37□□□□□ -1.55
VCP-205ENST00000479300 F2RL2O00254 374 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 MGST3O14880 152 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 TGOLN2O43493 480 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 XRCC3O43542 346 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 MPIG6BO95866 241 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 HAND1O96004 215 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 GHRHP01286 108 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 RBP4P02753 201 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 HCKP08631 526 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 LINC00614P0C842 121 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 CCL3L1P16619 93 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 CDK2P24941 298 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 CD34P28906 385 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 PCP4P48539 62 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 SNU13P55769 128 aaKnown RBP5.37□□□□□ -1.55
VCP-205ENST00000479300 TAS2R19P59542 299 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 ACTBP60709 375 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 SRSF3P84103 164 aaKnown RBP5.37□□□□□ -1.55
VCP-205ENST00000479300 ZNF85Q03923 595 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 GAGE1Q13065 139 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 COTL1Q14019 142 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 KIAA0141Q14154 515 aaPredicted RBP5.37□□□□□ -1.55
VCP-205ENST00000479300 RBM39Q14498 530 aaKnown RBP5.37□□□□□ -1.55
VCP-205ENST00000479300 UBE2V2Q15819 145 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 SPIN3Q5JUX0 258 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 RPL22L1Q6P5R6 122 aaKnown RBP5.37□□□□□ -1.55
VCP-205ENST00000479300 Q6ZSR3 168 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 C8orf86Q6ZUL3 223 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 KLHDC1Q8N7A1 406 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 WIPF2Q8TF74 440 aaPredicted RBP5.37□□□□□ -1.55
VCP-205ENST00000479300 TSEN15Q8WW01 171 aaKnown RBP5.37□□□□□ -1.55
VCP-205ENST00000479300 GHSRQ92847 366 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 SPSB1Q96BD6 273 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 GALNT14Q96FL9 552 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 KIRREL1Q96J84 757 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 C4orf36Q96KX1 117 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 NDUFAF3Q9BU61 184 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 HES4Q9HCC6 221 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 RPS10P5Q9NQ39 176 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 PARP11Q9NR21 331 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 AK6Q9Y3D8 172 aaKnown RBP5.37□□□□□ -1.55
VCP-205ENST00000479300 V9GY05 133 aa5.37□□□□□ -1.55
VCP-205ENST00000479300 TRBV2A0A0J9YWF9 115 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 WI2-2373I1.2A0A1W2PRP0 233 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 C7orf77A4D0Y5 90 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 C17orf98A8MV24 154 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 SIRPB1O00241 398 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 CHST1O43916 411 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 ISG15P05161 165 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 FCGR3AP08637 254 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 RD3LP0DJH9 198 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 IGHV1-8P0DP01 117 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 TMEM225BP0DP42 221 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 CD28P10747 220 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 LYL1P12980 280 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 SRMP19623 302 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 BCL3P20749 454 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 HTR2CP28335 458 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 BRS3P32247 399 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 CEACAM3P40198 252 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 KIR3DL2P43630 455 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 KIR2DS4P43632 304 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 OR2B8PP59922 312 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 KRTAP10-11P60412 298 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 ERVK11-1P61568 191 aa5.36□□□□□ -1.55
VCP-205ENST00000479300 CYCSP99999 105 aaKnown RBP5.36□□□□□ -1.55
VCP-205ENST00000479300 RSU1Q15404 277 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms