RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 TRAV24A0A0B4J272 114 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 CDKN1AP38936 164 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 FAM58AQ8N1B3 248 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 RPP25LQ8N5L8 163 aaKnown RBP11.89□□□□□ -0.51
CCDC78-210ENST00000478979 CNEP1R1Q8N9A8 125 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 VAMP8Q9BV40 100 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 SPRR3Q9UBC9 169 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 PXMP4Q9Y6I8 212 aa11.89□□□□□ -0.51
CCDC78-210ENST00000478979 YLPM1P49750 1951 aaKnown RBP11.89□□□□□ -0.51
CCDC78-210ENST00000478979 CDIPTO14735 213 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 WDR1O75083 606 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 PSG2P11465 335 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 LCN2P80188 198 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 LRRC75BQ2VPJ9 315 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 HAPLN4Q86UW8 402 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 GPR146Q96CH1 333 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 TNRC6AQ8NDV7 1962 aaKnown RBP11.88□□□□□ -0.51
CCDC78-210ENST00000478979 DMXL2Q8TDJ6 3036 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 PIEZO2Q9H5I5 2752 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 AGFG2O95081 481 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 NAPSAO96009 420 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 VN1R17PQ8TDU5 208 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 OR5P3Q8WZ94 311 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
CCDC78-210ENST00000478979 WDYHV1Q96HA8 205 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 RAB40CQ96S21 281 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 SLC25A22Q9H936 323 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 AURKAIP1Q9NWT8 199 aaPredicted RBP11.88□□□□□ -0.51
CCDC78-210ENST00000478979 COL27A1Q8IZC6 1860 aaPredicted RBP11.88□□□□□ -0.51
CCDC78-210ENST00000478979 KIAA1324LA8MWY0 1029 aaPredicted RBP11.88□□□□□ -0.51
CCDC78-210ENST00000478979 DEGS1O15121 323 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 CCL11P51671 97 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 UBE2NP61088 152 aaKnown RBP11.88□□□□□ -0.51
CCDC78-210ENST00000478979 RANP62826 216 aaKnown RBP11.88□□□□□ -0.51
CCDC78-210ENST00000478979 TCF23Q7RTU1 214 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 OR5D13Q8NGL4 314 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 C22orf15Q8WYQ4 148 aa11.88□□□□□ -0.51
CCDC78-210ENST00000478979 ZFHX2Q9C0A1 2572 aaPredicted RBP11.87□□□□□ -0.51
CCDC78-210ENST00000478979 KLRC4-KLRK1H3BQV0 150 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 ARR3P36575 388 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 PPP1CBP62140 327 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 RPS16P62249 146 aaKnown RBP11.87□□□□□ -0.51
CCDC78-210ENST00000478979 OR1K1Q8NGR3 316 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 PLPPR2Q96GM1 343 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 LINC00470Q9BZP3 86 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 WDR61Q9GZS3 305 aaKnown RBP11.87□□□□□ -0.51
CCDC78-210ENST00000478979 DLL3Q9NYJ7 618 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 PCNX1Q96RV3 2341 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 SERPINE2P07093 398 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 ADMP35318 185 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 ZNF826PQ6ZT77 177 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 OR5A2Q8NGI9 324 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 SLC35E1Q96K37 410 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 TECTBQ96PL2 329 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 HSPB9Q9BQS6 159 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 PATZ1Q9HBE1 687 aaKnown RBP11.87□□□□□ -0.51
CCDC78-210ENST00000478979 MSL2Q9HCI7 577 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 TMEM9BQ9NQ34 198 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 TRAPPC2LQ9UL33 140 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 ATP23Q9Y6H3 246 aa11.87□□□□□ -0.51
CCDC78-210ENST00000478979 PTPRZ1P23471 2315 aaPredicted RBP11.86□□□□□ -0.51
CCDC78-210ENST00000478979 ATMQ13315 3056 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 TRGV5A0A0B4J1U4 118 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 UBE2L5PA0A1B0GUS4 154 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 M0R296 226 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 PGLYRP1O75594 196 aaPredicted RBP11.86□□□□□ -0.51
CCDC78-210ENST00000478979 TUSC2O75896 110 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 GNG3P63215 75 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 ZNF766Q5HY98 468 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 Q6ZRM9 215 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 C20orf202A1L168 122 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 C1QTNF9BB2RNN3 333 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 H0Y980 276 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 CD46P15529 392 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 TPPP2P59282 170 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 MMDQ15546 238 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 TPRX1Q8N7U7 411 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 TP53TG3Q9ULZ0 132 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 KLF13Q9Y2Y9 288 aaPredicted RBP11.86□□□□□ -0.51
CCDC78-210ENST00000478979 OTOGLQ3ZCN5 2332 aa11.86□□□□□ -0.51
CCDC78-210ENST00000478979 KIR2DS1A0A191URI9 304 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 NKX2-8O15522 239 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 KIR2DS4P43632 304 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 KIR2DS1Q14954 304 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 RNPS1Q15287 305 aaKnown RBP11.85□□□□□ -0.51
CCDC78-210ENST00000478979 TMEM144Q7Z5S9 345 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 WDR86Q86TI4 376 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 OR10V1Q8NGI7 309 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 CIB3Q96Q77 187 aaPredicted RBP11.85□□□□□ -0.51
CCDC78-210ENST00000478979 WNT9BO14905 357 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 SYNGR2O43760 224 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 NXPH2O95156 264 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 HBG1P69891 147 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 HBG2P69892 147 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 PCSK4Q6UW60 755 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 TAF15Q92804 592 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCDC78-210ENST00000478979 TRIB1Q96RU8 372 aa11.85□□□□□ -0.51
CCDC78-210ENST00000478979 C21orf140B9A014 251 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms