RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 FIP1L1Q6UN15 594 aaKnown RBP9□□□□□ -0.97
VPS52-217ENST00000478934 C1orf229Q6ZS94 237 aaPredicted RBP9□□□□□ -0.97
VPS52-217ENST00000478934 C22orf34Q6ZV56 151 aa9□□□□□ -0.97
VPS52-217ENST00000478934 PIP4P1Q86T03 277 aa9□□□□□ -0.97
VPS52-217ENST00000478934 AGMATQ9BSE5 352 aa9□□□□□ -0.97
VPS52-217ENST00000478934 PLCE1Q9P212 2302 aa9□□□□□ -0.97
VPS52-217ENST00000478934 HSPB7Q9UBY9 170 aa9□□□□□ -0.97
VPS52-217ENST00000478934 IGKV1D-17A0A075B6S4 117 aa9□□□□□ -0.97
VPS52-217ENST00000478934 TRAV1-1A0A0B4J248 108 aa9□□□□□ -0.97
VPS52-217ENST00000478934 J3QW42 95 aa9□□□□□ -0.97
VPS52-217ENST00000478934 K7EM74 188 aa9□□□□□ -0.97
VPS52-217ENST00000478934 WNT2P09544 360 aa9□□□□□ -0.97
VPS52-217ENST00000478934 FGF7P21781 194 aa9□□□□□ -0.97
VPS52-217ENST00000478934 GCH1P30793 250 aa9□□□□□ -0.97
VPS52-217ENST00000478934 PRDX2P32119 198 aa9□□□□□ -0.97
VPS52-217ENST00000478934 ZNF134P52741 427 aa9□□□□□ -0.97
VPS52-217ENST00000478934 PRSS8Q16651 343 aa9□□□□□ -0.97
VPS52-217ENST00000478934 RPL39P5Q59GN2 51 aa9□□□□□ -0.97
VPS52-217ENST00000478934 DPPA3Q6W0C5 159 aa9□□□□□ -0.97
VPS52-217ENST00000478934 C1orf87Q8N0U7 546 aa9□□□□□ -0.97
VPS52-217ENST00000478934 SNIP1Q8TAD8 396 aaKnown RBP9□□□□□ -0.97
VPS52-217ENST00000478934 TMEM204Q9BSN7 226 aa9□□□□□ -0.97
VPS52-217ENST00000478934 QTRT1Q9BXR0 403 aaKnown RBP9□□□□□ -0.97
VPS52-217ENST00000478934 ZNF71Q9NQZ8 489 aaPredicted RBP9□□□□□ -0.97
VPS52-217ENST00000478934 VAX2Q9UIW0 290 aa9□□□□□ -0.97
VPS52-217ENST00000478934 GAB2Q9UQC2 676 aa9□□□□□ -0.97
VPS52-217ENST00000478934 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.99□□□□□ -0.97
VPS52-217ENST00000478934 PMS2P5A8MQ11 134 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 PRR33A8MZF0 331 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 CLDN34H7C241 214 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 AQP7O14520 342 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 CYB5R3P00387 301 aaPredicted RBP8.99□□□□□ -0.97
VPS52-217ENST00000478934 CRYAAP02489 173 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 OR9G9P0C7N8 305 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 UBE2G2P60604 165 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 FFAR4Q5NUL3 377 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 C16orf82Q7Z2V1 217 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 OR4F5Q8NH21 305 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 MBD3L1Q8WWY6 194 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 OR4F4Q96R69 305 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 TACC2O95359 2948 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 CSMD1Q96PZ7 3565 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 TRAV3A0A0B4J244 114 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 C15orf65H3BRN8 121 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 PPP1R2P9O14990 202 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 NDUFS6O75380 124 aaKnown RBP8.99□□□□□ -0.97
VPS52-217ENST00000478934 MEF2BQ02080 365 aaPredicted RBP8.99□□□□□ -0.97
VPS52-217ENST00000478934 ZNF718Q3SXZ3 478 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 HIST3H2BBQ8N257 126 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 OR51G1Q8NGK1 321 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 OR10G4Q8NGN3 311 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 OR10G9Q8NGN4 311 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 OR10G7Q8NGN6 311 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 Q8TCH9 128 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 DTD1Q8TEA8 209 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 PSMG3Q9BT73 122 aaPredicted RBP8.99□□□□□ -0.97
VPS52-217ENST00000478934 PRO1933Q9H354 126 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 SIRT7Q9NRC8 400 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 PLSCR4Q9NRQ2 329 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.99□□□□□ -0.97
VPS52-217ENST00000478934 RELNP78509 3460 aa8.99□□□□□ -0.97
VPS52-217ENST00000478934 TRAV17A0A0B4J275 112 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 RNF212BA8MTL3 300 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 M0R1B8 84 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 SLC31A2O15432 143 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 SPRY3O43610 288 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 FCGR3BO75015 233 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 CGAP01215 116 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 GZMHP20718 246 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 KITLGP21583 273 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 UNQ6494/PRO21346Q6UXR6 183 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 BHLHA15Q7RTS1 189 aaPredicted RBP8.98□□□□□ -0.97
VPS52-217ENST00000478934 H2BFWTQ7Z2G1 175 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 MRGPRGQ86SM5 289 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 TGIF2LYQ8IUE0 185 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 PFDN5Q99471 154 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 TRAV38-1A0A0B4J264 116 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 CXorf65A6NEN9 183 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 PGPEP1LA6NFU8 196 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 MARCH11A6NNE9 402 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 PAGE4O60829 102 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 IGLV1-44P01699 117 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 EDDM3BP56851 147 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 SERF2P84101 59 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 ZNF474Q6S9Z5 364 aaPredicted RBP8.98□□□□□ -0.97
VPS52-217ENST00000478934 MOGAT3Q86VF5 341 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 SARAFQ96BY9 339 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 PARLQ9H300 379 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 GNG12Q9UBI6 72 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 PROCRQ9UNN8 238 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 LAMP3Q9UQV4 416 aa8.98□□□□□ -0.97
VPS52-217ENST00000478934 SMCO3A2RU48 225 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 IFNL4K9M1U5 179 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 GAMTQ14353 236 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 SMIM21Q3B7S5 101 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 IGFL2Q6UWQ7 119 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 GCSAMQ8N6F7 178 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 RAB24Q969Q5 203 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 S100PBPQ96BU1 408 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 SDSLQ96GA7 329 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms