RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 CLN5O75503 358 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 PTBP3O95758 552 aaKnown RBP3.58□□□□□ -1.84
GPNMB-210ENST00000478451 IGKV1D-12P01611 117 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 ARG1P05089 322 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 BCL2P10415 239 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 DAOP14920 347 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 CBR1P16152 277 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 F2RP25116 425 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 GDF1P27539 372 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 AKR1C3P42330 323 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 HAAOP46952 286 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 NPBWR2P48146 333 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 CEBPGP53567 150 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 RPS18P62269 152 aaKnown RBP3.58□□□□□ -1.84
GPNMB-210ENST00000478451 POLR2GP62487 172 aaKnown RBP eCLIP3.58□□□□□ -1.84
GPNMB-210ENST00000478451 DLK1P80370 383 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 ELOBQ15370 118 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 MSMO1Q15800 293 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 HAGHQ16775 308 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 LBHQ53QV2 105 aaPredicted RBP3.58□□□□□ -1.84
GPNMB-210ENST00000478451 TMEM41BQ5BJD5 291 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 TSPO2Q5TGU0 170 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF818PQ6ZRF7 136 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 RBPMS2Q6ZRY4 209 aaKnown RBP3.58□□□□□ -1.84
GPNMB-210ENST00000478451 GAPTQ8N292 157 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 SUMF1Q8NBK3 374 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 OR10D3Q8NH80 312 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 AKR7LQ8NHP1 331 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 CLDND2Q8NHS1 167 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 SAP25Q8TEE9 199 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 MBD3L1Q8WWY6 194 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 ISOC2Q96AB3 205 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 ADGRG7Q96K78 797 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 YPEL4Q96NS1 127 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 DUX5Q96PT3 197 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 ALKBH3Q96Q83 286 aaPredicted RBP3.58□□□□□ -1.84
GPNMB-210ENST00000478451 OR5B12Q96R08 314 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 CABLES2Q9BTV7 478 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 SRXN1Q9BYN0 137 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 LIME1Q9H400 295 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 UBE2ZQ9H832 354 aaPredicted RBP3.58□□□□□ -1.84
GPNMB-210ENST00000478451 CALHM2Q9HA72 323 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 MANBALQ9NQG1 85 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 IL17BQ9UHF5 180 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 VAX2Q9UIW0 290 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 POLDIP2Q9Y2S7 368 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 NOSIPQ9Y314 301 aaKnown RBP3.58□□□□□ -1.84
GPNMB-210ENST00000478451 OR2W1Q9Y3N9 320 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 LIPGQ9Y5X9 500 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 CHD3Q12873 2000 aaKnown RBP3.58□□□□□ -1.84
GPNMB-210ENST00000478451 KNL1Q8NG31 2342 aa3.58□□□□□ -1.84
GPNMB-210ENST00000478451 IGLV5-37A0A075B6J1 123 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 TRBV24-1A0A075B6N3 115 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 A0A1B0GV50 99 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 hDV102S1A0JD36 115 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 SMCO3A2RU48 225 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 C5orf63A6NC05 138 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 LINC00587B1AMM8 73 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 C17orf112F2Z3M2 114 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 TMEM250H0YL14 139 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 HSD17B6O14756 317 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 PPIHO43447 177 aaKnown RBP3.57□□□□□ -1.84
GPNMB-210ENST00000478451 TRAPPC6AO75865 159 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 CST7O76096 145 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 IGHV2-70P01814 119 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 HLA-HP01893 362 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 SERPINA7P05543 415 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 UMODP07911 640 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 MMP7P09237 267 aaPredicted RBP3.57□□□□□ -1.84
GPNMB-210ENST00000478451 KLK2P20151 261 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 BCL3P20749 454 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 OMGP23515 440 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 HOXA6P31267 233 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 MKI67P46013 3256 aaKnown RBP3.57□□□□□ -1.84
GPNMB-210ENST00000478451 CYB561P49447 251 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 PSMB3P49720 205 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 FHITP49789 147 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 RND2P52198 227 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 NDUFA6P56556 154 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 B3GALT5-AS1P59052 145 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 SSTP61278 116 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 RAB11AP62491 216 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 GNG3P63215 75 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF154Q13106 437 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 CATR1Q13166 79 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 DCAF12Q5T6F0 453 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 NCR3LG1Q68D85 454 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF880Q6PDB4 577 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 KCNIP4Q6PIL6 250 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 NUFIP2Q7Z417 695 aaKnown RBP3.57□□□□□ -1.84
GPNMB-210ENST00000478451 YRDCQ86U90 279 aaKnown RBP3.57□□□□□ -1.84
GPNMB-210ENST00000478451 CALHM1Q8IU99 346 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 TGIF2LYQ8IUE0 185 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 TDHQ8IZJ6 230 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 FAM58AQ8N1B3 248 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 LINC00469Q8N7U9 141 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 CYB561D1Q8N8Q1 229 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 ZNF709Q8N972 641 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 OR56B2PQ8NGI1 322 aa3.57□□□□□ -1.84
GPNMB-210ENST00000478451 OR10V1Q8NGI7 309 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms