RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 B4DEV8 164 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 PRRG2O14669 202 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 SNRNP70P08621 437 aaKnown RBP10.11□□□□□ -0.79
PTPRF-212ENST00000477970 FAM87AP0C7U9 286 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 OR13C7P0DN81 318 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 BCL2P10415 239 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 NCR3LG1Q68D85 454 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 TMEM108Q6UXF1 575 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 OR10P1Q8NGE3 313 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 OR10A7Q8NGE5 316 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 RFESDQ8TAC1 157 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 CLN8Q9UBY8 286 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 IGSF10Q6WRI0 2623 aa10.11□□□□□ -0.79
PTPRF-212ENST00000477970 M0R036 132 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 SPRY3O43610 288 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 TSPAN9O75954 239 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 SPCS3P61009 180 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 RPP30P78346 268 aaKnown RBP10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF787Q6DD87 383 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF788Q6ZQV5 615 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF429Q86V71 674 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ABHD17AQ96GS6 310 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 GAFA1Q96PS6 74 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 LAMA5O15230 3695 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 A0A0G2JNJ9 132 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 CXorf65A6NEN9 183 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF729A6NN14 1252 aaPredicted RBP10.1□□□□□ -0.79
PTPRF-212ENST00000477970 IFNA1P01562 189 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 HOXA1P49639 335 aaPredicted RBP10.1□□□□□ -0.79
PTPRF-212ENST00000477970 FAM27E3Q08E93 113 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 LY6DQ14210 128 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF439Q8NDP4 499 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ADTRPQ96IZ2 230 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF251Q9BRH9 671 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF665Q9H7R5 613 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 SIRT7Q9NRC8 400 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 Q9UFV3 132 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 FAM208BQ5VWN6 2430 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 IGHV3OR15-7A0A075B7D8 119 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 TRGV8A0A0C4DH27 118 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 H3BQ15 152 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ZG16O60844 167 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 AGAP20933 346 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 HAGHQ16775 308 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 OR2B11Q5JQS5 317 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ETV3LQ6ZN32 361 aa10.1□□□□□ -0.79
PTPRF-212ENST00000477970 ESRP2Q9H6T0 727 aaKnown RBP10.1□□□□□ -0.79
PTPRF-212ENST00000477970 UBE2L5PA0A1B0GUS4 154 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 C16orf97H3BN30 126 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 RAB5BP61020 215 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 PNRC1Q12796 327 aaPredicted RBP10.09□□□□□ -0.79
PTPRF-212ENST00000477970 POU2AF1Q16633 256 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 TMEM249Q2WGJ8 235 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 C1QL4Q86Z23 238 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 Q8NA96 180 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 ZNRF1Q8ND25 227 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 TVP23CQ96ET8 276 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 VSIRQ9H7M9 311 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 NBEAQ8NFP9 2946 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 DSCAML1Q8TD84 2053 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 TANC2Q9HCD6 1990 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 DEFB108AA8MXU0 73 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 OR9G9P0C7N8 305 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 NQO2P16083 231 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 THBS3P49746 956 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 ZNF134P52741 427 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 KLRB1Q12918 225 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 KIAA2026Q5HYC2 2103 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 VAX2Q9UIW0 290 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 TP53TG5Q9Y2B4 290 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 RAI1Q7Z5J4 1906 aaPredicted RBP10.09□□□□□ -0.79
PTPRF-212ENST00000477970 TRGV10A0A0A0MS01 117 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 C15orf62A8K5M9 175 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 IFNA4P05014 189 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 CYB561D1Q8N8Q1 229 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 OR4S2Q8NH73 311 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 S1PR3Q99500 378 aa10.09□□□□□ -0.79
PTPRF-212ENST00000477970 CFAP47Q6ZTR5 3102 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 CTXND1A0A1B0GTU2 59 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 A0A1B0GV50 99 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 C17orf112F2Z3M2 114 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 MPDU1O75352 247 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 HABP2Q14520 560 aaPredicted RBP10.08□□□□□ -0.8
PTPRF-212ENST00000477970 FAM90A2PQ658T7 463 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 C22orf34Q6ZV56 151 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 TCF23Q7RTU1 214 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 NIPSNAP3BQ9BS92 247 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 QTRT1Q9BXR0 403 aaKnown RBP10.08□□□□□ -0.8
PTPRF-212ENST00000477970 IDI2-AS1Q9NZ38 188 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 MAP1LC3B2A6NCE7 125 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 M0R1X1 148 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 FCGR3BO75015 233 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 TNFRSF1AP19438 455 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 BMP5P22003 454 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 VDAC2P45880 294 aaPredicted RBP10.08□□□□□ -0.8
PTPRF-212ENST00000477970 ERVK-16P61578 105 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 RELBQ01201 579 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 OR8G2PQ6IF36 304 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 SSX7Q7RTT5 188 aa10.08□□□□□ -0.8
PTPRF-212ENST00000477970 CA5BP1Q8WTZ4 195 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms