RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 MOSP00540 346 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 IFNA10P01566 189 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 IFNA21P01568 189 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 IFNA14P01570 189 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 IFNA17P01571 189 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 GAPDHP04406 335 aaKnown RBP3.04□□□□□ -1.92
VPS50-214ENST00000477935 TROVE2P10155 538 aaKnown RBP eCLIP3.04□□□□□ -1.92
VPS50-214ENST00000477935 NCK1P16333 377 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 GCAP28676 217 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 CD1BP29016 333 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 IL12AP29459 219 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 PRKXP51817 358 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 KRTAP10-8P60410 259 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 GRB2P62993 217 aaKnown RBP3.04□□□□□ -1.92
VPS50-214ENST00000477935 PRKCDQ05655 676 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 TMEM267Q0VDI3 215 aaPredicted RBP3.04□□□□□ -1.92
VPS50-214ENST00000477935 ZNF816Q0VGE8 651 aaPredicted RBP3.04□□□□□ -1.92
VPS50-214ENST00000477935 ST3GAL3Q11203 375 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 KRR1Q13601 381 aaKnown RBP3.04□□□□□ -1.92
VPS50-214ENST00000477935 ZBED5Q49AG3 693 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 RAB12Q6IQ22 244 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 HAGHLQ6PII5 290 aaPredicted RBP3.04□□□□□ -1.92
VPS50-214ENST00000477935 TCF23Q7RTU1 214 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 ZDHHC21Q8IVQ6 265 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 RDH10Q8IZV5 341 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 CEND1Q8N111 149 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 SPATA4Q8NEY3 305 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 LZICQ8WZA0 190 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 HSPB9Q9BQS6 159 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 COPS4Q9BT78 406 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 NDUFAF3Q9BU61 184 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 RNF126Q9BV68 326 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 NSRP1Q9H0G5 558 aaKnown RBP3.04□□□□□ -1.92
VPS50-214ENST00000477935 C11orf68Q9H3H3 251 aaKnown RBP3.04□□□□□ -1.92
VPS50-214ENST00000477935 NIPAL2Q9H841 368 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 ZNF286AQ9HBT8 521 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 HES4Q9HCC6 221 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 AIG1Q9NVV5 245 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 CNOT2Q9NZN8 540 aaKnown RBP3.04□□□□□ -1.92
VPS50-214ENST00000477935 PSMC3IPQ9P2W1 217 aaPredicted RBP3.04□□□□□ -1.92
VPS50-214ENST00000477935 SLC7A11Q9UPY5 501 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 N6AMT1Q9Y5N5 214 aa3.04□□□□□ -1.92
VPS50-214ENST00000477935 IGLV8-61A0A075B6I0 122 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 TRAV27A0A087WT01 109 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 A0A0G2JLM5 398 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 G3V318 75 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 OR2A4O95047 310 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 NDUFB2O95178 105 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 SLC2A1P11166 492 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 IDO1P14902 403 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 GPX2P18283 190 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 ALDH3A1P30838 453 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 SYNJ2BPP57105 145 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 CDC42P60953 191 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 SSTP61278 116 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 EDDM3AQ14507 147 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 GRK1Q15835 563 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 GUCA2BQ16661 112 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 DEFB135Q30KP9 77 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 KLHL12Q53G59 568 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 PRAMEF5Q5TYX0 476 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 FAHD1Q6P587 224 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 MOB3BQ86TA1 216 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 ENTHD1Q8IYW4 607 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 ELMOD2Q8IZ81 293 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 GPR32P1Q8NGA4 272 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 OR4D11Q8NGI4 311 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 IFT81Q8WYA0 676 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 GTF2H4Q92759 462 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 PKNOX2Q96KN3 472 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 GPX7Q96SL4 187 aaPredicted RBP3.03□□□□□ -1.92
VPS50-214ENST00000477935 CST11Q9H112 138 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 ZNF355PQ9NSJ1 428 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 CD300AQ9UGN4 299 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 NACAE9PAV3 2078 aa3.03□□□□□ -1.92
VPS50-214ENST00000477935 TRAV10A0A0B4J240 114 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 IGHV1-3A0A0C4DH29 117 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 ZNF729A6NN14 1252 aaPredicted RBP3.02□□□□□ -1.93
VPS50-214ENST00000477935 ZNF878C9JN71 531 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 J3QT63 122 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 DCTN6O00399 190 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 CXCR6O00574 342 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 ZSCAN12O43309 604 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 IGHV3-11P01762 117 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 HLA-DRB1P01911 266 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 SCTP09683 121 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 CTRB1P17538 263 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 GABRR1P24046 479 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 HSD11B1P28845 292 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 PTGFRP43088 359 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 MAP2K4P45985 399 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 HAAOP46952 286 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 CX3CR1P49238 355 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 RPL14P50914 215 aaKnown RBP3.02□□□□□ -1.93
VPS50-214ENST00000477935 BNIP1Q12981 228 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 DEFB114Q30KQ6 69 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 AKIRIN2Q53H80 203 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 ZNF660Q6AZW8 331 aaPredicted RBP3.02□□□□□ -1.93
VPS50-214ENST00000477935 CTRB2Q6GPI1 263 aa3.02□□□□□ -1.93
VPS50-214ENST00000477935 CD200R1LQ6Q8B3 271 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms