RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 SULT1A2P50226 295 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 ATP5IP56385 69 aaPredicted RBP5.5□□□□□ -1.53
LDB3-206ENST00000477489 ERVK-16P61578 105 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 RPL31P62899 125 aaKnown RBP5.5□□□□□ -1.53
LDB3-206ENST00000477489 HBG1P69891 147 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 HBG2P69892 147 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 EWSR1Q01844 656 aaKnown RBP eCLIP5.5□□□□□ -1.53
LDB3-206ENST00000477489 ATP6V1FQ16864 119 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 DPPA3Q6W0C5 159 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 IL34Q6ZMJ4 242 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 SLC25A48Q6ZT89 311 aaKnown RBP5.5□□□□□ -1.53
LDB3-206ENST00000477489 COMMD7Q86VX2 200 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 KRTAP19-1Q8IUB9 90 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 FOXRED2Q8IWF2 684 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 PUSL1Q8N0Z8 303 aaKnown RBP5.5□□□□□ -1.53
LDB3-206ENST00000477489 COMMD1Q8N668 190 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 TMEM252Q8N6L7 170 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 ZNF439Q8NDP4 499 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 OR4S2Q8NH73 311 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 LINC01560Q8TB33 94 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 TCTEX1D2Q8WW35 142 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 CCL17Q92583 94 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 GNPNAT1Q96EK6 184 aaPredicted RBP5.5□□□□□ -1.53
LDB3-206ENST00000477489 TIMD4Q96H15 378 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 S1PR3Q99500 378 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 CCL13Q99616 98 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 HIPK2Q9H2X6 1198 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 PARP11Q9NR21 331 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 CACNG5Q9UF02 275 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 FBXL17Q9UF56 701 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 RNF150Q9ULK6 438 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 PSG11Q9UQ72 335 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 BSNQ9UPA5 3926 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 ICE1Q9Y2F5 2266 aa5.5□□□□□ -1.53
LDB3-206ENST00000477489 hCG_1809904A0A1W2PP81 198 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 A0A1W2PPE2 198 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 A0A1W2PR64 198 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 A0A1W2PRV1 198 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 TXNL1O43396 289 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 HRASP01112 189 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 OR8U8P0C7N1 319 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 ZNF16P17020 682 aaPredicted RBP5.49□□□□□ -1.53
LDB3-206ENST00000477489 NDUFB7P17568 137 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 IL3RAP26951 378 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 CAV2P51636 162 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 ZNF137PP52743 207 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 POLR2GP62487 172 aaKnown RBP eCLIP5.49□□□□□ -1.53
LDB3-206ENST00000477489 RPP30P78346 268 aaKnown RBP5.49□□□□□ -1.53
LDB3-206ENST00000477489 TNFRSF9Q07011 255 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 KRTAP21-3Q3LHN1 58 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 C11orf71Q6IPW1 123 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 TCF23Q7RTU1 214 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 H2BFWTQ7Z2G1 175 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 ZNF429Q86V71 674 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 FAM216BQ8N7L0 139 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 TPRX1Q8N7U7 411 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 DEFB108BQ8NET1 73 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 C8orf46Q8TAG6 207 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 DDB2Q92466 427 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 RAB1CQ92928 201 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 TMEM186Q96B77 213 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 TSNAXQ99598 290 aaKnown RBP5.49□□□□□ -1.53
LDB3-206ENST00000477489 PCGF1Q9BSM1 259 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 PARP12Q9H0J9 701 aaKnown RBP5.49□□□□□ -1.53
LDB3-206ENST00000477489 BARX1Q9HBU1 254 aaPredicted RBP5.49□□□□□ -1.53
LDB3-206ENST00000477489 MIOXQ9UGB7 285 aa5.49□□□□□ -1.53
LDB3-206ENST00000477489 PRRC2CQ9Y520 2896 aaKnown RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 SAA2-SAA4A0A096LPE2 208 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 BTBD17A6NE02 478 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 MARCH11A6NNE9 402 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 C17orf98A8MV24 154 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 A8MXK9 166 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 M0R1X1 148 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 CHST1O43916 411 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 SSSCA1O60232 199 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 IGHV2-70P01814 119 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 FAM157CP0CG43 387 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 SAA2P0DJI9 122 aaPredicted RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 SPP1P10451 314 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 IGFBP2P18065 325 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 ZP3P21754 424 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 F2RL1P55085 397 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 UBE2KP61086 200 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 RPL30P62888 115 aaKnown RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 AANATQ16613 207 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 RTL8BQ17RB0 113 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 CT45A1Q5HYN5 189 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 CXorf66Q5JRM2 361 aaPredicted RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 FAM201AQ5SY85 155 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 RPL7L1Q6DKI1 246 aaKnown RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 TMEM14EPQ6UXP3 125 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 ZNF833PQ6ZTB9 187 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 C5orf24Q7Z6I8 188 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 LFNGQ8NES3 379 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 OR1S2Q8NGQ3 325 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 OR9G1Q8NH87 305 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 CT45A3Q8NHU0 189 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 LYPD6BQ8NI32 183 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 RFESDQ8TAC1 157 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 OSR1Q8TAX0 266 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms