RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 OR2W1Q9Y3N9 320 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 RBM7Q9Y580 266 aaKnown RBP7.66□□□□□ -1.18
HDAC3-208ENST00000476739 LINC00473A8K010 186 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 H7C2Y5 167 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 NBR2O15453 112 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 PLXNB1O43157 2135 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 NDUFA3O95167 84 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 PMP2P02689 132 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 FCGR2CP31995 323 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 DUTP33316 252 aaKnown RBP7.65□□□□□ -1.18
HDAC3-208ENST00000476739 SOX6P35712 828 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 HTR2BP41595 481 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 RFX2P48378 723 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 RPL30P62888 115 aaKnown RBP7.65□□□□□ -1.18
HDAC3-208ENST00000476739 TET2Q6N021 2002 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-208ENST00000476739 SLC35E3Q7Z769 313 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 ZNF329Q86UD4 541 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 CMYA5Q8N3K9 4069 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 ZNF645Q8N7E2 425 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-208ENST00000476739 NPBQ8NG41 125 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 OR5AU1Q8NGC0 362 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 OR5AP2Q8NGF4 316 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 OR8H1Q8NGG4 311 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 SGMS2Q8NHU3 365 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 DDB2Q92466 427 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 ABHD1Q96SE0 405 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 GPHA2Q96T91 129 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 RASL11BQ9BPW5 248 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 SLIRPQ9GZT3 109 aaKnown RBP7.65□□□□□ -1.18
HDAC3-208ENST00000476739 IFT46Q9NQC8 304 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 NECAP2Q9NVZ3 263 aa7.65□□□□□ -1.18
HDAC3-208ENST00000476739 ADARB2-AS1A8MUL3 147 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 FCN1O00602 326 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 RGS5O15539 181 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 FBXO24O75426 580 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 B3GALNT1O75752 331 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 TSPAN15O95858 294 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 PPYP01298 95 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 OR5H8P0DN80 308 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 C4BPBP20851 252 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 MC5RP33032 325 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 LUMP51884 338 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-208ENST00000476739 EIF4EBP1Q13541 118 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-208ENST00000476739 C5orf64Q2M2E5 130 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 PRR31Q5SQ13 230 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 ZNF660Q6AZW8 331 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-208ENST00000476739 OVCH2Q7RTZ1 564 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 CENPVQ7Z7K6 275 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-208ENST00000476739 BVESQ8NE79 360 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 ST6GAL2Q96JF0 529 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 CITED2Q99967 270 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-208ENST00000476739 FBXL15Q9H469 300 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 CCL28Q9NRJ3 127 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 SLC35D1Q9NTN3 355 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 KLK11Q9UBX7 282 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 ADAM30Q9UKF2 790 aa7.64□□□□□ -1.19
HDAC3-208ENST00000476739 IGHV7-81A0A0B4J1V7 117 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 PSMB11A5LHX3 300 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 SRRM4A7MD48 611 aaKnown RBP7.63□□□□□ -1.19
HDAC3-208ENST00000476739 IGLV2-23P01705 113 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 C1QBP02746 253 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 HRH1P35367 487 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 BRWD1-AS2P59051 145 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 FXYD4P59646 89 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 RPS16P62249 146 aaKnown RBP7.63□□□□□ -1.19
HDAC3-208ENST00000476739 NDPQ00604 133 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 CD83Q01151 205 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 PSG5Q15238 335 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 NSUN5P1Q3KNT7 163 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 PDPNQ86YL7 162 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 STPG2Q8N412 459 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 OR52I2Q8NH67 350 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 SECTM1Q8WVN6 248 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 HYLS1Q96M11 299 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 CITED4Q96RK1 184 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 C6orf62Q9GZU0 229 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-208ENST00000476739 TPSG1Q9NRR2 321 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 EHFQ9NZC4 300 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 FBXO7Q9Y3I1 522 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 WNK1Q9H4A3 2382 aa7.63□□□□□ -1.19
HDAC3-208ENST00000476739 A0A1W2PRX2 142 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 G3V318 75 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 RRHO14718 337 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 TNFSF12O43508 249 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 RBBP9O75884 186 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 HLA-DRB1P01911 266 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 APOA2P02652 100 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 ATF4P18848 351 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-208ENST00000476739 THBS3P49746 956 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 NKX2-5P52952 324 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-208ENST00000476739 RAB14P61106 215 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 DGCR2P98153 550 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 FLI1Q01543 452 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-208ENST00000476739 CFHR3Q02985 330 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 DYRK1AQ13627 763 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 OR2B11Q5JQS5 317 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 LIN54Q6MZP7 749 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 DHRS11Q6UWP2 260 aa7.62□□□□□ -1.19
HDAC3-208ENST00000476739 ZNF818PQ6ZRF7 136 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms