RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 RAB2BQ8WUD1 216 aa14.8□□□□□ -0.04
PTCD3-210ENST00000473829 SECTM1Q8WVN6 248 aa14.8□□□□□ -0.04
PTCD3-210ENST00000473829 MIXL1Q9H2W2 232 aa14.8□□□□□ -0.04
PTCD3-210ENST00000473829 CCL28Q9NRJ3 127 aa14.8□□□□□ -0.04
PTCD3-210ENST00000473829 ZFP57Q9NU63 452 aa14.8□□□□□ -0.04
PTCD3-210ENST00000473829 EHFQ9NZC4 300 aa14.8□□□□□ -0.04
PTCD3-210ENST00000473829 SMIM31A0A1B0GVY4 71 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 FAM25AB3EWG3 89 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 FAM25CB3EWG5 89 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 FAM25GB3EWG6 89 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 SHOXO15266 292 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 SOX15O60248 233 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 SLC22A5O76082 557 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 PMP2P02689 132 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 PF4P02776 101 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 RRASP10301 218 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 LGALS7P47929 136 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 RFX2P48378 723 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 TMBIM6P55061 237 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 FXYD4P59646 89 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 CBX3Q13185 183 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 CXorf66Q5JRM2 361 aaPredicted RBP14.79□□□□□ -0.04
PTCD3-210ENST00000473829 OVCH2Q7RTZ1 564 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 LYSMD2Q8IV50 215 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 MINDY2Q8NBR6 621 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 DYNC2LI1Q8TCX1 351 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 KLK15Q9H2R5 256 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 TAS2R8Q9NYW2 309 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 A3GALT2U3KPV4 340 aa14.79□□□□□ -0.04
PTCD3-210ENST00000473829 NUDT19A8MXV4 375 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 FCGR3BO75015 233 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 IGLV1-40P01703 118 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 BRWD1-AS2P59051 145 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 DEFA6Q01524 100 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 DYRK1AQ13627 763 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 SAMD5Q5TGI4 173 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 ZNF562Q6V9R5 426 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 PPP1R27Q86WC6 154 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 ZNF695Q8IW36 515 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 MYOZ3Q8TDC0 251 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 ABHD5Q8WTS1 349 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 GIMAP1Q8WWP7 306 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 DUX3Q96PT4 197 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 HSD17B10Q99714 261 aaKnown RBP14.78□□□□□ -0.04
PTCD3-210ENST00000473829 BCL7BQ9BQE9 202 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 SLC5A7Q9GZV3 580 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 EXTL2Q9UBQ6 330 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 ADAM30Q9UKF2 790 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 NUBP2Q9Y5Y2 271 aa14.78□□□□□ -0.04
PTCD3-210ENST00000473829 H3BMQ9 156 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 TNFSF12O43508 249 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 TAS2R46P59540 309 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 KIAA0141Q14154 515 aaPredicted RBP14.77□□□□□ -0.05
PTCD3-210ENST00000473829 DEFB136Q30KP8 78 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 RNASE12Q5GAN4 147 aaKnown RBP14.77□□□□□ -0.05
PTCD3-210ENST00000473829 IDO2Q6ZQW0 420 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 TMEM17Q86X19 198 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 LAX1Q8IWV1 398 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 MFSD4AQ8N468 514 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 OR5H2Q8NGV7 314 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 OSR1Q8TAX0 266 aaPredicted RBP14.77□□□□□ -0.05
PTCD3-210ENST00000473829 CASTOR1Q8WTX7 329 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 TCTEX1D2Q8WW35 142 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 ARPC1AQ92747 370 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 ISOC1Q96CN7 298 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 SCPEP1Q9HB40 452 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 NOTCH3Q9UM47 2321 aa14.77□□□□□ -0.05
PTCD3-210ENST00000473829 A0A1W2PN81 502 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 CTDSP2O14595 271 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 SAA1P0DJI8 122 aaPredicted RBP14.76□□□□□ -0.05
PTCD3-210ENST00000473829 HLA-DMAP28067 261 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 HRH1P35367 487 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 CHRNA7P36544 502 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 UBE2KP61086 200 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 GNB1P62873 340 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 FXYD3Q14802 87 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 MSMO1Q15800 293 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 OXLD1Q5BKU9 147 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 DHRS11Q6UWP2 260 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 ZNF818PQ6ZRF7 136 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 LINC00482Q8N8I6 264 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 LFNGQ8NES3 379 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 WFDC9Q8NEX5 89 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 GRPEL2Q8TAA5 225 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 RAX2Q96IS3 184 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 ZNF2Q9BSG1 426 aaPredicted RBP14.76□□□□□ -0.05
PTCD3-210ENST00000473829 FXYD6Q9H0Q3 95 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 CCDC59Q9P031 241 aaKnown RBP14.76□□□□□ -0.05
PTCD3-210ENST00000473829 PRELID3BQ9Y3B1 194 aa14.76□□□□□ -0.05
PTCD3-210ENST00000473829 CD33P20138 364 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 RCVRNP35243 200 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 CDX1P47902 265 aaPredicted RBP14.75□□□□□ -0.05
PTCD3-210ENST00000473829 HERV-K104P61576 105 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 BEAN1Q3B7T3 259 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 UNQ5815/PRO19632Q6UWF5 114 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 ZNF66Q6ZN08 573 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 MRPL41Q8IXM3 137 aaKnown RBP14.75□□□□□ -0.05
PTCD3-210ENST00000473829 MOB3AQ96BX8 217 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 ABHD1Q96SE0 405 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 P2RX4Q99571 388 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms