RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PRR20EP86478 221 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 PRR20CP86479 221 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 PRR20DP86480 221 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 PRR20BP86481 221 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 PRR20AP86496 221 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 ATP5G2Q06055 141 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 ST3GAL4Q11206 333 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 PLA2G7Q13093 441 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 P2RY14Q15391 338 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 TNXAQ16473 311 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 PRSS8Q16651 343 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 TMEM177Q53S58 311 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 IGSF11Q5DX21 431 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 LYG2Q86SG7 212 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 SRSF12Q8WXF0 261 aaKnown RBP9.4□□□□□ -0.9
TRAF4-209ENST00000473421 TMEM68Q96MH6 324 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 PHB2Q99623 299 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 A0A0B4J203 849 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 A0A1B0GW64 132 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 TMEM213A2RRL7 107 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 HMX3A6NHT5 357 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 LINC00473A8K010 186 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 E7EUB6 86 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 SHOXO15266 292 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 AIREO43918 545 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 SCAF4O95104 1147 aaKnown RBP9.39□□□□□ -0.91
TRAF4-209ENST00000473421 CD37P11049 281 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 PLAC9Q5JTB6 97 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 MOB1BQ7L9L4 216 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 CEACAM19Q7Z692 300 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 FAM89BQ8N5H3 189 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 ARHGAP5-AS1Q96IT6 56 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 C9orf16Q9BUW7 83 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 GGTLC1Q9BX51 225 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 OR2D2Q9H210 308 aa9.39□□□□□ -0.91
TRAF4-209ENST00000473421 RASSF2P50749 326 aa9.38□□□□□ -0.91
TRAF4-209ENST00000473421 TNFRSF9Q07011 255 aa9.38□□□□□ -0.91
TRAF4-209ENST00000473421 C15orf32Q32M92 178 aa9.38□□□□□ -0.91
TRAF4-209ENST00000473421 ACSM3Q53FZ2 586 aa9.38□□□□□ -0.91
TRAF4-209ENST00000473421 ACOT12Q8WYK0 555 aa9.38□□□□□ -0.91
TRAF4-209ENST00000473421 MAFIPQ8WZ33 124 aa9.38□□□□□ -0.91
TRAF4-209ENST00000473421 PECRQ9BY49 303 aa9.38□□□□□ -0.91
TRAF4-209ENST00000473421 ZNF430Q9H8G1 570 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-209ENST00000473421 KCNK7Q9Y2U2 307 aa9.38□□□□□ -0.91
TRAF4-209ENST00000473421 LOC102724200A0A096LPH7 203 aaPredicted RBP9.37□□□□□ -0.91
TRAF4-209ENST00000473421 NUPR2A6NF83 97 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 FAM223BA6NKX1 122 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 TRDCB7Z8K6 153 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 BET1O15155 118 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 ATP5HO75947 161 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 NDUFB8O95169 186 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 CRYZL1O95825 349 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 GSTT2P0CG29 244 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 GSTT2BP0CG30 244 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 UBBP0CG47 229 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 UBE2KP61086 200 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 TM4SF20Q53R12 229 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 FAM223AQ8IWN6 122 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 SETD9Q8NE22 299 aa9.37□□□□□ -0.91
TRAF4-209ENST00000473421 TECRQ9NZ01 308 aaKnown RBP9.37□□□□□ -0.91
TRAF4-209ENST00000473421 EFCAB10A6NFE3 127 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 TEX22C9J3V5 150 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 MPPED1O15442 326 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 S1PR2O95136 353 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 CD1AP06126 327 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 GNAO1P09471 354 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 SAA1P0DJI8 122 aaPredicted RBP9.36□□□□□ -0.91
TRAF4-209ENST00000473421 SRMP19623 302 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 CLDN12P56749 244 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 RBM48Q5RL73 367 aaKnown RBP9.36□□□□□ -0.91
TRAF4-209ENST00000473421 GLT8D1Q68CQ7 371 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 ZFP1Q6P2D0 407 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 BTNL8Q6UX41 500 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 CLEC19AQ6UXS0 136 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 UNQ9165/PRO28630Q6UXU0 137 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 WFDC3Q8IUB2 231 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 VKORC1L1Q8N0U8 176 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 TTC9CQ8N5M4 171 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 NANOGP1Q8N7R0 232 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 TEX45Q8NA69 505 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 UXS1Q8NBZ7 420 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.36□□□□□ -0.91
TRAF4-209ENST00000473421 NECAP1Q8NC96 275 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 OR52B4Q8NGK2 314 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 KCTD12Q96CX2 325 aaKnown RBP9.36□□□□□ -0.91
TRAF4-209ENST00000473421 FANCD2OSQ96PS1 177 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 CMSS1Q9BQ75 279 aaKnown RBP9.36□□□□□ -0.91
TRAF4-209ENST00000473421 RIMS4Q9H426 269 aaPredicted RBP9.36□□□□□ -0.91
TRAF4-209ENST00000473421 S100A14Q9HCY8 104 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 C12orf4Q9NQ89 552 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 SMPD3Q9NY59 655 aaPredicted RBP9.36□□□□□ -0.91
TRAF4-209ENST00000473421 UBQLN2Q9UHD9 624 aa9.36□□□□□ -0.91
TRAF4-209ENST00000473421 IGKV1D-8A0A087WSZ0 117 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 IRGMA1A4Y4 181 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 ZNF320A2RRD8 509 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 J3QRK9 145 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 LGALS9O00182 355 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 FABP7O15540 132 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms