RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 CEACAM3P40198 252 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 RAB13P51153 203 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 S100A10P60903 97 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 CLEC12BQ2HXU8 276 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 OR2B11Q5JQS5 317 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 UTF1Q5T230 341 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 ACOT7LQ6ZUV0 252 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 H2BFWTQ7Z2G1 175 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 TGIF2LXQ8IUE1 241 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 Q8N7P7 452 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 OR1S1Q8NH92 325 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 GPR146Q96CH1 333 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 R3HDM4Q96D70 268 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 MBD6Q96DN6 1003 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 MFFQ9GZY8 342 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 SLC35D1Q9NTN3 355 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 MBD2Q9UBB5 411 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 TNFSF18Q9UNG2 199 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 NSG2Q9Y328 171 aa10.45□□□□□ -0.74
VPS13D-205ENST00000473099 IGHV4-30-2A0A087WSY4 118 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 MARCH11A6NNE9 402 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 BUB1B-PAK6H3BSN5 160 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 K7EPK0 472 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 WRBO00258 174 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 PITX3O75364 302 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 SCGB1D2O95969 90 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 KRASP01116 189 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 MBPP02686 304 aaPredicted RBP10.44□□□□□ -0.74
VPS13D-205ENST00000473099 GAPDHP04406 335 aaKnown RBP10.44□□□□□ -0.74
VPS13D-205ENST00000473099 P0C879 139 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 CT45A6P0DMU7 189 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 CT45A5P0DMU8 189 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 CT45A7P0DMV0 189 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 ZFP36P26651 326 aaKnown RBP10.44□□□□□ -0.74
VPS13D-205ENST00000473099 BRWD1-AS2P59051 145 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 LCN2P80188 198 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 ID3Q02535 119 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 POU2AF1Q16633 256 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 DEFB113Q30KQ7 82 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 LGALSLQ3ZCW2 172 aaPredicted RBP10.44□□□□□ -0.74
VPS13D-205ENST00000473099 LAMTOR1Q6IAA8 161 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 PDPNQ86YL7 162 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 FAM71E2Q8N5Q1 922 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 ZNF383Q8NA42 475 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 OR5AN1Q8NGI8 311 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 GRPEL2Q8TAA5 225 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 OSR1Q8TAX0 266 aaPredicted RBP10.44□□□□□ -0.74
VPS13D-205ENST00000473099 DCUN1D4Q92564 292 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 NRGNQ92686 78 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 RNF126Q9BV68 326 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 GON7Q9BXV9 100 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 CACNG5Q9UF02 275 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 LSM5Q9Y4Y9 91 aaKnown RBP10.44□□□□□ -0.74
VPS13D-205ENST00000473099 CR1P17927 2039 aa10.44□□□□□ -0.74
VPS13D-205ENST00000473099 ABCA12Q86UK0 2595 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 IGHV4-61A0A0C4DH41 118 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 LEUTXA8MZ59 168 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 MED6O75586 246 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 LY86O95711 162 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 CRYZL1O95825 349 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 EPHA1P21709 976 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 USF1P22415 310 aaPredicted RBP10.43□□□□□ -0.74
VPS13D-205ENST00000473099 HTR1DP28221 377 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 S100A11P31949 105 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 DVL1P1P54792 670 aaPredicted RBP10.43□□□□□ -0.74
VPS13D-205ENST00000473099 PNKDQ8N490 385 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 DMBX1Q8NFW5 382 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 NABP2Q9BQ15 211 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 MRPL20Q9BYC9 149 aaKnown RBP10.43□□□□□ -0.74
VPS13D-205ENST00000473099 SIRPDQ9H106 197 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 SLA2Q9H6Q3 261 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.43□□□□□ -0.74
VPS13D-205ENST00000473099 WASHC3Q9Y3C0 194 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 TNCP24821 2201 aa10.43□□□□□ -0.74
VPS13D-205ENST00000473099 A0A0G2JRQ6 117 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 ODF3BA8MYP8 253 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 OOSP1A8MZH6 123 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 H0YIZ8 118 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 H0YJW9 148 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 TOX4O94842 621 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 ARG1P05089 322 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 COX7A1P24310 79 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 G6PCP35575 357 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 P2RY1P47900 373 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 TMEM177Q53S58 311 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 MINOS1Q5TGZ0 78 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 PRSS57Q6UWY2 283 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 C1orf229Q6ZS94 237 aaPredicted RBP10.42□□□□□ -0.74
VPS13D-205ENST00000473099 TMUB2Q71RG4 321 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 VMO1Q7Z5L0 202 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 FOXRED2Q8IWF2 684 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 OR8H3Q8N146 312 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 KCNRGQ8N5I3 272 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 OR4P4Q8NGL7 312 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 OR4C13Q8NGP0 309 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 RPEQ96AT9 228 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 AQP10Q96PS8 301 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 RAB40CQ96S21 281 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 SIRT7Q9NRC8 400 aa10.42□□□□□ -0.74
VPS13D-205ENST00000473099 DPM3Q9P2X0 92 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms