RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 M0R1X1 148 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 OR2C1O95371 312 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 FOLR2P14207 255 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 CELP19835 753 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 AADACP22760 399 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 ZBTB25P24278 435 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 RHOGP84095 191 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 GUCA2BQ16661 112 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 PDPNQ86YL7 162 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 KCNG3Q8TAE7 436 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 SNAPC3Q92966 411 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 TMEM80Q96HE8 168 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 TMEM68Q96MH6 324 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 GFI1Q99684 422 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 LPAR5Q9H1C0 372 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 SLC35D1Q9NTN3 355 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 SDHAF2Q9NX18 166 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 PEMTQ9UBM1 199 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 GHRLQ9UBU3 117 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 EXOSC1Q9Y3B2 195 aaKnown RBP6.95□□□□□ -1.3
VCL-204ENST00000472585 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.94□□□□□ -1.3
VCL-204ENST00000472585 AIREO43918 545 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 OR9G9P0C7N8 305 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 LGALS7P47929 136 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 HLA-DRB3P79483 266 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 TNFRSF9Q07011 255 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 PLA2G7Q13093 441 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 TMEM177Q53S58 311 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 IDO2Q6ZQW0 420 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 LINC00336Q6ZUF6 198 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 LYG2Q86SG7 212 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 FAM89BQ8N5H3 189 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 TMEM217Q8N7C4 229 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 DYNLRB2Q8TF09 96 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 GGTLC1Q9BX51 225 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 TMEM59Q9BXS4 323 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 CHMP1AQ9HD42 196 aaPredicted RBP6.94□□□□□ -1.3
VCL-204ENST00000472585 PLEKHJ1Q9NW61 149 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 RDH8Q9NYR8 311 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 MLXQ9UH92 298 aa6.94□□□□□ -1.3
VCL-204ENST00000472585 A0A1B0GW64 132 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 E7EUB6 86 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 CD1AP06126 327 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 CBLN1P23435 193 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 ATP5G2Q06055 141 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 ST3GAL4Q11206 333 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 EXOSC2Q13868 293 aaKnown RBP6.93□□□□□ -1.3
VCL-204ENST00000472585 PRSS8Q16651 343 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 IGSF11Q5DX21 431 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 PLAC9Q5JTB6 97 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 C10orf55Q5SWW7 151 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 SLC16A13Q7RTY0 426 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 TMEM61Q8N0U2 210 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 NKAIN3Q8N8D7 197 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 SETD9Q8NE22 299 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 PHLDA1Q8WV24 401 aaPredicted RBP6.93□□□□□ -1.3
VCL-204ENST00000472585 SRSF12Q8WXF0 261 aaKnown RBP6.93□□□□□ -1.3
VCL-204ENST00000472585 C9orf16Q9BUW7 83 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 ZNF221Q9UK13 617 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 KCNK7Q9Y2U2 307 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 S4R3C0 116 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 ABCA13Q86UQ4 5058 aa6.93□□□□□ -1.3
VCL-204ENST00000472585 LOC102724200A0A096LPH7 203 aaPredicted RBP6.92□□□□□ -1.3
VCL-204ENST00000472585 A0A0B4J203 849 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 TMEM213A2RRL7 107 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 LINC00473A8K010 186 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 CIB2O75838 187 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 OR2J3O76001 311 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 IGHV3-23P01764 117 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 APOA2P02652 100 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 UBBP0CG47 229 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 MYL12AP19105 171 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 BMI1P35226 326 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 TAGLNQ01995 201 aaKnown RBP6.92□□□□□ -1.3
VCL-204ENST00000472585 TNXAQ16473 311 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 ACSM3Q53FZ2 586 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 MOB1BQ7L9L4 216 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 TTC9CQ8N5M4 171 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 ARHGAP5-AS1Q96IT6 56 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 HARBI1Q96MB7 349 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 CCDC140Q96MF4 163 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 PECRQ9BY49 303 aa6.92□□□□□ -1.3
VCL-204ENST00000472585 RIMS4Q9H426 269 aaPredicted RBP6.92□□□□□ -1.3
VCL-204ENST00000472585 ZNF430Q9H8G1 570 aaPredicted RBP6.92□□□□□ -1.3
VCL-204ENST00000472585 HMX3A6NHT5 357 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 FAM223BA6NKX1 122 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 TRDCB7Z8K6 153 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 TEX22C9J3V5 150 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 LGALS9O00182 355 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 SHOXO15266 292 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 SPRY2O43597 315 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 ATP5HO75947 161 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 SCAF4O95104 1147 aaKnown RBP6.91□□□□□ -1.3
VCL-204ENST00000472585 IL6RP08887 468 aaPredicted RBP6.91□□□□□ -1.3
VCL-204ENST00000472585 GSTT2P0CG29 244 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 GSTT2BP0CG30 244 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 ATF4P18848 351 aaPredicted RBP6.91□□□□□ -1.3
VCL-204ENST00000472585 SRMP19623 302 aa6.91□□□□□ -1.3
VCL-204ENST00000472585 DUTP33316 252 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms