RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 MINDY2Q8NBR6 621 aa12.88□□□□□ -0.35
PCOLCE-205ENST00000472348 FLYWCH2Q96CP2 140 aaKnown RBP12.88□□□□□ -0.35
PCOLCE-205ENST00000472348 MARVELD1Q9BSK0 173 aa12.88□□□□□ -0.35
PCOLCE-205ENST00000472348 C1RLQ9NZP8 487 aa12.88□□□□□ -0.35
PCOLCE-205ENST00000472348 COMMD9Q9P000 198 aa12.88□□□□□ -0.35
PCOLCE-205ENST00000472348 VPREB3Q9UKI3 123 aa12.88□□□□□ -0.35
PCOLCE-205ENST00000472348 LINC00854A0A1B0GVQ3 168 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 A6NDX4 124 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 FGF16O43320 207 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 OR2F2O95006 317 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 ANXA3P12429 323 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 UCP1P25874 307 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 SRPXP78539 464 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 PLET1Q6UQ28 207 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 NRARPQ7Z6K4 114 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 SIGLECL1Q8N7X8 197 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 NPBQ8NG41 125 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 TCTEX1D2Q8WW35 142 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 IL22RA2Q969J5 263 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 EAF1Q96JC9 268 aaPredicted RBP12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 RBM14Q96PK6 669 aaKnown RBP12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 C20orf85Q9H1P6 137 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 OCEL1Q9H607 264 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 NAA60Q9H7X0 242 aa12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 NIPBLQ6KC79 2804 aaeCLIP12.87□□□□□ -0.35
PCOLCE-205ENST00000472348 C3orf85A0A1B0GTC6 90 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 H3BUX3 64 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 PRAF2O60831 178 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 ATG12O94817 140 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 NDUFA3O95167 84 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 HRASP01112 189 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 IFNA2P01563 188 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 RLN1P04808 185 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 SNRNP70P08621 437 aaKnown RBP12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 BRWD1-AS2P59051 145 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 RGS21Q2M5E4 152 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 PHLDA2Q53GA4 152 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 SPAG16Q8N0X2 631 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 LRTM2Q8N967 370 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 C22orf15Q8WYQ4 148 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 TMEM230Q96A57 120 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 TSNAXQ99598 290 aaKnown RBP12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 TMEM222Q9H0R3 208 aa12.86□□□□□ -0.35
PCOLCE-205ENST00000472348 TEX13DA0A0J9YY54 714 aaPredicted RBP12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 H7C2Y5 167 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 TCF21O43680 179 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 PEX14O75381 377 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 CDS2O95674 445 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 IGKV1D-33P01593 117 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 IGKV1-33P01594 117 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 IL5P05113 134 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 DRAXINQ8NBI3 349 aaPredicted RBP12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 VSTM2AQ8TAG5 236 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 CAPSLQ8WWF8 208 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 NUDT15Q9NV35 164 aa12.85□□□□□ -0.35
PCOLCE-205ENST00000472348 A0A0B4J2A0 478 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 HOXA3O43365 443 aaPredicted RBP12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 TNFSF12O43508 249 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 FCGR3BO75015 233 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 IGKV1-16P04430 117 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 RNASE1P07998 156 aaKnown RBP12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 H2AFB2P0C5Z0 115 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 NQO2P16083 231 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 TMEM11P17152 192 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 PI3P19957 117 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 SUPT4H1P63272 117 aaKnown RBP12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 ZNF585BQ52M93 769 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 GLDNQ6ZMI3 551 aaPredicted RBP12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 PRIMA1Q86XR5 153 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 TEX45Q8NA69 505 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 OR51H1Q8NH63 302 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 TMEM56Q96MV1 263 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 SHPKQ9UHJ6 478 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 SOX21Q9Y651 276 aaPredicted RBP12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 TMEM56-RWDD3S4R434 201 aa12.84□□□□□ -0.35
PCOLCE-205ENST00000472348 MDFIC2A0A1B0GVS7 189 aa12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 ARPC1BO15143 372 aaKnown RBP12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 CREBL2O60519 120 aaPredicted RBP12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 SERPINE2P07093 398 aa12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 OR4E1P0C645 316 aa12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 OXA1LQ15070 435 aa12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 SLC9A3R2Q15599 337 aa12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 FAM219AQ8IW50 185 aa12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 ADAD2Q8NCV1 583 aaKnown RBP12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 OR4A5Q8NH83 315 aa12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 RANBP3Q9H6Z4 567 aaPredicted RBP12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 PLSCR3Q9NRY6 295 aa12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 MOB4Q9Y3A3 225 aa12.83□□□□□ -0.36
PCOLCE-205ENST00000472348 DNAJC9-AS1A6NH13 148 aa12.82□□□□□ -0.36
PCOLCE-205ENST00000472348 SHOXO15266 292 aa12.82□□□□□ -0.36
PCOLCE-205ENST00000472348 NBR2O15453 112 aa12.82□□□□□ -0.36
PCOLCE-205ENST00000472348 SFT2D2O95562 160 aa12.82□□□□□ -0.36
PCOLCE-205ENST00000472348 DUS4LO95620 317 aaKnown RBP12.82□□□□□ -0.36
PCOLCE-205ENST00000472348 CRYZL1O95825 349 aa12.82□□□□□ -0.36
PCOLCE-205ENST00000472348 DHFRP00374 187 aa12.82□□□□□ -0.36
PCOLCE-205ENST00000472348 IL6RP08887 468 aaPredicted RBP12.82□□□□□ -0.36
PCOLCE-205ENST00000472348 AKR1C4P17516 323 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms